Xenopus tropicalis (tropical clawed frog): 100490238
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Entry
100490238 CDS
T01011
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100490238 (prdm13)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100490238 (prdm13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_7th_ZNF462
zf-C2H2_15
zf-BED
DUF7128
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
100490238
NCBI-ProteinID:
XP_002932206
Xenbase:
XB-GENE-960155
UniProt:
A0A6I8PSL5
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All DBs
Position
5:complement(81990418..81996829)
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AA seq
632 aa
AA seq
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MHCNRALAVSIYADNCIPAGLRLGPIMGIFKLGKYLSDRREPGPKKKVRFVRGDLLDEAG
GPATEWMGLIRAARNNQEQILEAISDLPGGQIYYRTLRDVQPGEELTVWYSSSLAQWFDI
STTATPTHDEKGEERYICWYCWRTFKFPNTLKAHVHFHCSLNSSRGFLHNDQIRTSQSFS
ASPKISEGVSNTAPPLRTNPQLANGASRDSIKREASLSPVLSKLGVIKKALGKEHQERAL
DMSVGSTRNHSQFIGIVGNACGGNGMAFYPGIRSAFKPTGLSKLPHTDSAREDSKATSMG
FSKLLGGIKPSRPGSEALISSHQSKCLSTGDGSSSILSCATGLRGFPILSHLEETSAFKH
VERGVHANLSPTSRYNHMPSAGLHFERFSIPPFEGMKSYSAECNIPVMPFTVYNGELLYS
TPYYPFKFHFSNLIKYPESVSYFNAGPAINPELGSIASSIDRELAMHSHQLSEIASEKGR
GGRIESLAAGAASATGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFG
DPSNLNKHIRLHAEGNTPYRCEHCGKVLVRRRDLERHVKSRHPGQTLSSKEQDPAEQQYS
QADPKSEDNDSEVDVCFTDEQSDPETGSSKEQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcaacagggctctggccgtcagcatctacgccgacaactgcatccctgccggc
ctgcgacttggtcccatcatgggcatcttcaaactagggaagtacttgtcagatcgcagg
gaacctggacccaagaaaaaggtgcgttttgtgagaggggacctgcttgatgaggctgga
ggtcccgccacagaatggatgggcttaatcagagcagccagaaacaatcaggaacagatt
ctggaagctatatctgatttaccaggaggccagatatattataggactctgagggacgtg
cagccaggagaagaactcactgtatggtactccagttcccttgcacagtggtttgacatc
tccactacagccactccgacccatgatgaaaaaggagaggagcgctacatctgttggtat
tgctggagaacatttaaattccccaacaccctgaaagcccacgttcattttcactgctcc
cttaacagcagcagggggtttctgcataacgatcagatcagaacctctcaatccttttct
gcgtccccgaaaatctcggaaggagtgtccaacacagcccccccactgaggaccaacccc
cagctagccaacggggcaagcagggactctattaaaagggaggcctctttatctcctgta
ctgagcaagctcggggtgatcaagaaggctctgggcaaagaacaccaggagagagccttg
gatatgagtgtgggatctacacgaaaccacagccagtttattggcatagtgggcaatgca
tgtggagggaatggcatggcattttatccaggaatcagatctgcttttaaaccaactgga
ctatcgaagttaccccataccgattcagccagagaagactcaaaggccaccagcatggga
ttcagcaaactattggggggcatcaagcctagtcgcccagggagtgaagctctgatcagt
agccaccaatccaagtgtctgtctactggagatggctcatctagcatcttgtcctgtgcc
actgggctaagaggtttccctatcctatcacatctggaggaaacatcagccttcaaacac
gtagaaagaggggtccatgccaacctctcccccaccagccgctacaaccatatgccttca
gcaggacttcactttgaaagattctccattcctccatttgaaggcatgaagtcatattct
gcagaatgtaatatcccggtcatgcctttcactgtatacaacggagaacttctttatagc
actccttactatccctttaaatttcatttcagtaaccttattaagtacccagagtcagtg
tcgtatttcaatgctgggccagctatcaacccggagctgggctccattgcctccagcata
gaccgtgagcttgccatgcacagccatcagctttctgagatagcaagcgagaagggcagg
gggggcaggatagagagcctcgcagcaggggcagcttctgctactggcaaacccaagaaa
gggcacctttgtttgtactgtggcaagttgtactctaggaaatatggcttgaaaatccac
atgaggactcacactggctacaagcctctaaagtgtaaggtttgcctgaggccttttggg
gacccgagcaacctcaacaaacacattcgcctgcatgcggagggcaacaccccttaccgc
tgtgagcactgtggcaaagtcctggtgcggcggagggatctggagaggcatgtgaaatcc
aggcaccccgggcagaccctgagcagcaaggagcaggatccagcggaacagcagtattct
caggcagatcccaaaagtgaggacaatgacagtgaggtggacgtgtgtttcactgatgaa
cagagtgacccggagacaggaagcagcaaggagcagtag
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