Xenopus tropicalis (tropical clawed frog): 100490334
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Entry
100490334 CDS
T01011
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100490334 (gabra1)
04082 Neuroactive ligand signaling
100490334 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100490334 (gabra1)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
GABA-A
100490334 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100490334
NCBI-ProteinID:
XP_031754594
Xenbase:
XB-GENE-6033338
UniProt:
A0A6I8QDI1
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Position
3:24385013..24481179
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AA seq
454 aa
AA seq
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MKRRLTFLDCLWAWTIMLNLTSEISCGQSTQDEIKDNTTIFTRILDRLLDGYDNRLRPGL
GERVTEVNTDIFVTSFGPVSDHDMEYTIDVFFRQGWRDERLKFKGPMTVLRLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
LKFGSYAYTRAEVVYSWTREPSLSVVVAEDGSRLNQYDLLGQTVASGIVQSSTGEYIVMT
THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
IKKNNTYASATANYPPTIPRDPGLATIAKSATIEPKDIEPKPKPAEPKKTFNSVSKIDRL
SRIAFPLLFGTFNLVYWATYLNREPAIKPSNPPQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagactgacgttcttagattgtctctgggcctggaccattatgctaaacctt
acaagtgaaataagctgcggacaaagcacacaggatgagattaaagacaatacaactata
ttcacaaggatcctggaccgtcttcttgatggctacgataaccgcctaaggccaggactg
ggagagcgtgtaacagaagtgaacacggatatctttgtcaccagctttggacctgtctct
gatcatgatatggaatacacaatcgatgtatttttccgtcaaggatggagggatgaaaga
ttgaaattcaagggacccatgactgttctccgacttaacaacttaatggccagtaaaata
tggacaccagacaccttttttcacaatggaaaaaaatcggtggctcacaacatgaccatg
ccaaacaaactgctacgaataacagaggatgggactcttttgtatacgatgcgattgact
gtacgagcggaatgtcccatgcatttagaggatttcccaatggatgcacatgcttgccca
ttgaaatttggaagctatgcctacacaagagcagaagtggtgtatagttggaccagggaa
ccatctctatctgttgtagtagctgaagatggctctcgtttaaatcagtatgaccttctc
ggtcaaacagtggcatctggaattgtccaatcgagtacaggagaatatattgttatgacg
actcacttccacttgaagaggaagatcggttattttgtcattcagacctacttaccatgc
atcatgaccgtcattttgtcccaagtctccttctggctcaatagagaatctgttcctgca
aggactgtatttggtgttacaactgtccttaccatgaccactctgagtattagtgcccgg
aattcacttccaaaagtggcctatgccactgccatggactggttcattgcggtgtgttat
gcctttgtcttctctgccctcatcgagtttgcaaccgtcaattactttacaaaaagagga
tacgcgtgggacgggaaaagcgttgttccagaaaagccaaaaaaggtgaaggaccctctt
attaagaaaaacaacacatatgcttctgcaactgcaaactatcctcccaccataccgcgg
gatcctggtctggcaaccatcgccaaaagtgcaaccatagaaccgaaagatattgagcca
aaaccaaagccagcagaacccaagaaaacattcaacagtgttagcaaaattgaccggcta
tcaagaatagcatttcctcttctttttggaacctttaacttagtttactgggcaacatac
ctaaaccgggagccagcaattaaaccttcaaatccacctcaataa
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