Xenopus tropicalis (tropical clawed frog): 100490337
Help
Entry
100490337 CDS
T01011
Symbol
gcnt1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00512
Mucin type O-glycan biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
100490337 (gcnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100490337 (gcnt1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
100490337 (gcnt1)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
100490337 (gcnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
100490337
NCBI-ProteinID:
XP_002942654
Xenbase:
XB-GENE-996858
UniProt:
A0A7D9N0A4
LinkDB
All DBs
Position
1:131972645..131980713
Genome browser
AA seq
426 aa
AA seq
DB search
MLTRKLRHCKVKRVNFLFLVALAVATFTFITSRSKYAFFTNLELTEDNPIISANCTKIIK
GDVEEIQNAKLELLTVKYKSQQHQLTDEDYINMTNDCEAFTRDRKYLLYPLSKEEREFPI
AYSIVVYHRIDMLERLLRSIYTPQNYYCIHVDKKSSTSFLNAVKAITSCFENVFIASQLE
NVVYASWARVQADLNCMTDLHNKNAKWKYLINLCGMDFPIKTNREMVEMLKGLKSQNSLE
TEKMPPHKEVRWRKHYEIVDNAIRKTEEDKTPPPLETPVFSGSAYFVVTRAFVSYILENE
KIQRFLEWSKDTYSPDEFIWATLQRIPGVPGSVPANSKYDVSDMNAYARFVKWAYLEGDV
AKGAPYPPCAGNHVRSVCVFGAGDLEFMLQKHHLFGNKFDIDVDPTAIKCLEEHLRHKAL
NPELQI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctgacacgcaaactacgacattgtaaagtaaaacgagtgaactttttgttccttgtg
gcacttgctgtagcaacctttacatttataacaagccgcagcaaatatgctttttttacc
aacctggaacttacagaagataatccaattatttctgctaactgcaccaagattataaaa
ggagatgttgaggaaatccagaatgccaaattggagttgttaacagtcaagtacaaaagc
cagcagcatcagctcacagatgaagactatatcaatatgacaaatgactgtgaagccttt
accagagaccgaaaatatttattgtacccactaagcaaagaagaaagggagttccccatt
gcatattcaatagtggtctatcataggattgacatgctagagaggcttctgcgctccata
tacactcctcagaattactactgcattcatgtggacaagaaatcttctacatcttttcta
aatgcagtgaaggccattacttcttgttttgaaaatgtgttcattgctagccagttagaa
aatgtggtgtatgcatcatgggctagggtgcaggccgatctaaattgtatgactgatctt
cacaataaaaatgcaaaatggaaatacttaataaacctctgtggtatggatttcccaata
aaaactaaccgagagatggtagaaatgttaaagggattaaagagtcaaaacagcctggaa
actgaaaagatgcctccccataaagaggttcggtggcgaaaacattatgagattgttgac
aatgccattaggaaaactgaagaagacaaaacacctcctccactcgagacaccagtgttt
tctggtagtgcctacttcgttgtaacacgagcatttgttagttacattttggaaaatgaa
aaaatccaacgttttttagaatggtctaaggacacatacagtcctgatgaatttatatgg
gccactcttcaacgaattcctggagtaccaggttctgtaccagctaatagcaaatatgat
gtttctgatatgaacgcttatgccagatttgtaaaatgggcatacttagaaggagatgtg
gccaaaggagcaccatatcccccttgtgctgggaatcatgttcgttccgtttgtgtattt
ggggctggggacctggaatttatgctgcagaagcaccacttgtttggtaacaagtttgat
atcgatgtggaccctactgccattaagtgcctagaggaacatttaagacacaaagcactc
aatccagaactacaaatttaa
DBGET
integrated database retrieval system
