Xenopus tropicalis (tropical clawed frog): 100490526
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Entry
100490526 CDS
T01011
Symbol
ccdc117
Name
(RefSeq) coiled-coil domain-containing protein 117
KO
K27967
coiled-coil domain-containing protein 117
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100490526 (ccdc117)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100490526 (ccdc117)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100490526 (ccdc117)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100490526 (ccdc117)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC117
Motif
Other DBs
NCBI-GeneID:
100490526
NCBI-ProteinID:
XP_017946117
Xenbase:
XB-GENE-22068162
UniProt:
A0A803KA92
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All DBs
Position
1:complement(166373331..166382917)
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AA seq
344 aa
AA seq
DB search
MAAVGTPFNGMLYRMDFHKSSDSLHQISNLQSSIDNSFFSADMSKHNPANPASTGSSVNF
NNAYFNMYSLCNQSPSSTGGGITPFMPNAIVSPNSGGGLGCSATGSGFPHSSRNKHKREE
DIFECPLKKRRISEHAEVPIFPEPTTCHSSADILIGETLGSSWDSNCKSKTTTALQYSDS
ELLPVMHSAQTEEMEESSSESFSPVCGRAQVNYSRLSSTNDELEMDKTSDHLPSLIMSDV
LKEGLKRGFEESLTKKIVDSMNRPSMELVLWKPQSELLFDRLQAVFKSHKKERDLKKPAP
SASQTTSFIQEIEIIEDDHLCSSEPTSDLNRTWSRDDEEEEMEL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagttggtacaccatttaatggcatgctgtatagaatggattttcataagtct
tcagactctttacatcaaatttcaaatctccagagctcaatagataactcatttttttct
gctgatatgagcaaacataacccagctaaccctgcttcaacgggaagttctgtgaacttt
aataatgcatattttaatatgtatagtctctgcaatcaatctcccagttcgactggtgga
ggcataactccatttatgccaaatgctatagtatcaccgaactctggaggtggtttggga
tgctcggctactggctctgggttcccacattcctcaagaaataaacataaaagagaggag
gatatctttgagtgtccgttgaaaaaaagaagaatttcagaacatgcagaagtccctata
ttccctgaacctactacatgccattcctcagcagatattttaattggtgaaacattagga
agttcctgggactctaattgtaagtctaaaacaaccacagcccttcaatattctgactct
gaattattaccagtgatgcattcagcccagactgaagagatggaggaatcatccagtgaa
tctttctctcctgtatgtggaagagctcaagtaaattatagcaggctaagtagcactaat
gatgaattggaaatggacaaaacatctgaccatttgccgtcacttatcatgtctgatgtt
cttaaagaaggtttaaagcgaggttttgaagaatccctgacaaagaagattgtagattca
atgaatcgtccttctatggagctggtcctctggaaaccccagtctgagttgctttttgac
aggctgcaggcagtttttaaaagccataagaaggaaagagatttgaaaaagcctgcccct
tcagcatcccaaaccacctccttcattcaggaaatagaaataattgaggatgatcacttg
tgcagttcagaacctacaagtgacctaaatagaacttggagcagagatgatgaagaagaa
gaaatggaactataa
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