Xenopus tropicalis (tropical clawed frog): 100490556
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Entry
100490556 CDS
T01011
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100490556 (trim16)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100490556 (trim16)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100490556 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
DUF7310
Motif
Other DBs
NCBI-GeneID:
100490556
NCBI-ProteinID:
XP_031750579
Xenbase:
XB-GENE-995242
UniProt:
A0A803JSB8
LinkDB
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Position
10:48481254..48494527
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AA seq
564 aa
AA seq
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MADTGAPLSSKPVCKSQSASAMVPLARKEEEKPGTIAKSKSAAQLGTNISANGSARDVDK
PKPPAADVDAPDVVLCDFCLETKVKAVKTCLTCMINYCEAHLRPHLEKPKLHAHQLVGPI
NDAELRRCSTHNKPLDWFCQEDLLCLCQDCAMEQHREHNPIPCSEARRQKEAEVHETVAE
YEWKLKSAEIAIEKLEANTTSIQNSVSEAKRAINLQFEDVHSAVNKSHTKVLEFLELRER
AALNQSNGIKTHLEQKCSELRKCKVKAERIASHRNEFSFLQEYCEFKKSAGDDTLPSVYI
GLKDKLSGIQRVISEATEKIIEMLQTSYLERLQVFAKEEDLGIKTMVSAIVPKEHRISAP
EPASRNEFLKYKSNLTLDPVTAHRFLRLLEDNRKVSNTAPWQHPYPDDPQRFEDFRQVLS
VESFYIGRHYYEVEFKGEEVHMGVTYKCIDRKGSESNSCITGNDFSWTLKWNGKEFSAWH
SDVETPLKTEKFPRVGIYINYVSGNISFYGVADKMTLLHQFEGKFAEPLYAAFWLPKKES
SVVVLSPDNIMLPPGSSPTAAGTP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacgggtgcccccctcagctccaaacccgtgtgtaaaagccagagtgccagc
gccatggtgcccttggccaggaaggaggaagagaagccgggcacgatagccaagagtaaa
tctgcagcccagcttggcaccaacatttctgcaaatggatctgccagggatgtggataaa
cccaagccccccgcggcggatgttgatgcccccgacgtagtcctgtgcgacttttgctta
gagacgaaggtgaaagccgtgaagacgtgtctgacctgcatgattaactactgtgaggcg
catctccgaccccacctggagaagcccaagctgcatgctcaccagctggtgggccccatc
aacgacgccgagctgcggaggtgcagcacccacaacaagccgctcgactggttctgccag
gaggatctactgtgcctttgccaagactgtgccatggagcagcacagggagcacaacccg
atcccctgcagcgaggcgaggaggcagaaagaggctgaagtacacgagacggtggcagaa
tatgaatggaaactgaagtcggccgagatcgccatcgagaaactggaggcaaacaccaca
tccatccagaattcagtttcagaagccaagagggctattaacctccagtttgaggatgtg
cacagcgccgttaataagtcccacaccaaggtgctggagttcctggagctgagggagcgg
gcggctctgaaccagtccaacgggatcaagacccacctggagcagaagtgcagcgagctg
agaaagtgcaaagtgaaggcggagaggatcgccagtcacaggaacgaattctccttccta
caggagtactgtgaatttaagaagtccgcgggggacgacacccttcccagtgtttacatc
gggctgaaggacaagctgtcggggatacaaagggtgatttccgaagcgacggagaagatc
atcgaaatgctacagacctcgtacctggagcggctgcaggtgtttgctaaggaagaggat
cttgggataaaaacaatggtttcggccatcgtcccaaaggagcatcggatcagcgccccc
gagccggcgtcgcgcaacgagttcctgaaatataagtccaaccttaccctggatccggta
accgctcatcggttcctccggctgttagaagacaaccgcaaggtgtccaacaccgccccc
tggcaacatccgtaccccgatgacccccaacggtttgaggacttcaggcaggtgctgagc
gtggagagcttctacatcgggcgccattattacgaggtcgagtttaaaggggaagaggtt
cacatgggcgtgacctacaaatgcatcgacaggaaggggtcggagagcaacagctgcatc
acggggaatgacttctcctggaccttaaagtggaacgggaaagagttctccgcctggcac
agcgatgtggaaacccctctcaaaacagagaaatttccccgggtgggaatctatattaac
tatgtgagtggcaatatatcgttctatggggtcgcggacaaaatgaccctcttgcaccag
ttcgagggcaagtttgcagaaccgctctatgcagccttttggctacccaagaaggaaagt
tctgtggtggttttaagcccagataatataatgttgcctcctggctcgtctcctacagca
gctggcactccctga
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