Xenopus tropicalis (tropical clawed frog): 100490580
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Entry
100490580 CDS
T01011
Symbol
grin2b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100490580 (grin2b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100490580 (grin2b)
04082 Neuroactive ligand signaling
100490580 (grin2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100490580 (grin2b)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100490580 (grin2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
100490580
NCBI-ProteinID:
XP_017948700
Xenbase:
XB-GENE-949327
UniProt:
A0A6I8QFJ2
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All DBs
Position
4:complement(114148395..114421567)
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AA seq
1449 aa
AA seq
DB search
MRPTEACCYLKISLIILFYMGCYAQKHPNMDIAVILVGTTDEVAIKDVHEKDDFHHLPVT
PRVALVTMNESDPKSIITRICDLMSDKKVQGVVFGDDTDQEAIAQILDFISVQTLTPILG
IHGGSSMIMADKEEASMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFENK
VRSTIENSFVGWELEEVIHLDMSLDDNDSKIQNQLKKLQSPVILLYCTKEEATYIFEVAH
SVGLTGYGYTWIVPSLVAGDTDTVPAEFPTGLISVSYDEWDYDLPARVRDGIAIITTAAS
TMLSEHNSIPQSKSSCYNIQESRVYEAHMLKRYLINVTFEGRNLSFSEDGYQMHPKLVII
LLNQQRKWERVGKYKDRSLKMKYYVWPVFELYPNSEEHKDEHLSIVTLEEAPFVIVEDVD
PLSGTCMRNTVPCRKQIRTENRTEEGGNYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTN
GKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNG
TVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIG
KAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQV
SGLSDKKFQRPNDFSPAFRFGTVPNGSTERNIRNNYLEMHSYMVKFNQRSVQDALLSLKT
GKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRQVDLAILQL
FGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFIMEHLFF
WQLRHCFMGVCSGKPGVVFSISRGIYSCIHGVPIEDRQSAMNSPSATMNNTHSNILRLLR
TAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSFQPEENLFSDYISEV
ERTFGNLQLKDSNVYQDHFHHHRPHSIGSNSSIDGLYDCDNAPFTTQPRSLSKKPLDIGL
PSKHSSTQIGDLYGKFSFKSDRYGAPDDLIRSDVSDISTHTVTYGNIEGNAKRRKQYKDS
LKKRPASAKSRREFDEIELAYRRRPRSPDHKRYFRDKEGLRDFYLDQFRTKENNPHWEHV
DLTHIYPERAEDFKHETSCANRQHQKHGGEFVQNERKHGPGGNAWEKNMSNVEWEDRTSS
NFCRNCPSKMHNYTGQNTNRQACIRCEVCKKAGNLYDISEDNSLQDLDARPIPAANSKYP
QSPSNGKAQKRNRSKLHRQHSYDTFVDLQKEDVTLAPRSVSLKDKERFLDGSPYAHMFEM
PNETSFTSKSHGPSHNPGGYMLSRSLYPDRVTQNPFIPTFGDDQCLLHGSKPYYFRQPAI
GGLKGRADFRGAGKSLSSLHSGPPGHFQKDICIGNQPNACVSNNKNPRSFNNSTNGHVYE
KLSSIESDV
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccacagaagcctgctgctacttaaaaatcagcttgattatacttttttatatg
ggttgctatgcccagaaacatcccaacatggacattgctgtcattttggtgggcactaca
gacgaggttgccatcaaagatgtacacgaaaaagatgacttccatcacctgcctgtgaca
ccaagggtggcgcttgtcaccatgaatgagtctgaccctaaaagtataattacacgtatc
tgtgacctcatgtccgacaagaaggttcaaggggtcgtgtttggtgatgacaccgatcag
gaggctatagctcagatattggactttatttctgtacagacgcttactccaatcctgggt
attcatggcggatcttcgatgatcatggctgataaggaggaggcatccatgttctttcag
tttggaccctctatcgagcagcaggcctcggtcatgctgaacatcatggaagaatacgac
tggtatatcttcagtatagtcaccacatatttcccaggataccaggactttgagaacaag
gtacgaagtaccattgaaaacagttttgtggggtgggagcttgaagaggttatccatctg
gacatgtctttagatgataatgactccaaaatccagaaccagctgaagaagcttcagagt
cccgtcatcttgctttactgcacaaaggaagaagcaacatatattttcgaagtggctcat
tctgtggggttgacaggttacggctacacatggattgtaccaagtcttgttgcaggagat
actgacactgtgccagctgagttccccacaggactcatctcagtatcttatgatgagtgg
gactatgatctgcctgctcgggttagagacgggattgctataatcaccacagcagcatcc
accatgctctctgagcacaattccattcctcagtccaagagcagctgttacaacattcaa
gagagtagagtctatgaagctcacatgttaaaaaggtacttgatcaatgtgacgtttgaa
ggtcggaacctctcattcagcgaagatggctaccagatgcatcccaagctggtcatcatt
ctgctcaaccaacagaggaaatgggaacgggtgggaaagtacaaggaccgaagccttaag
atgaagtactatgtctggcccgtgtttgagctgtaccccaattcagaggaacacaaggat
gagcacctgagcatcgtgacattggaggaggctccatttgttattgttgaagatgtggat
ccactaagtgggacctgcatgaggaatactgttccgtgtcgcaagcagatacgcactgag
aaccgcactgaagaggggggaaactacatcaagagatgctgcaagggtttctgcatagat
atcctgaagaaaatagctaagactgtcaaattcacctatgatctctatctggtgaccaac
ggcaagcatggcaaaaaaattaatgggacatggaatggaatgattggagaggtggtgacc
aagcgagcctacatggccgttggatctctgaccataaatgaagaacgctcggaagtggtg
gacttctctgtacctttcatagagacaggcatcagtgtcatggtctcaagaagcaatggg
acagtgtctccctctgcattcctagagccattcagtgcggatgtgtgggttatgatgttt
gtgatgctcctcattgtatcggcagttgctgtctttgtatttgagtactttagcccagtg
ggatacaacaggtgccttgcagatggccgagagcctggtgggccctcatttaccattggg
aaagccatttggctgctttggggccttgtgttcaataactctgtgcctgtacagaaccca
aagggaaccacaagtaaaataatggtatcagtttgggcctttttcgctgtcatcttcctg
gccagttacactgctaaccttgcagccttcatgatccaagaggagtatgttgaccaagtg
tctggactaagtgataaaaagtttcaacgacccaatgacttctctccagcttttcgattt
ggaactgttcctaatggcagcacagaaaggaatatccgtaacaactacctggagatgcac
tcgtacatggttaaattcaatcagcgatctgtgcaggatgctcttctttctctaaagact
ggcaagttggatgcctttatctatgatgctgcagttctaaactacatggctgggcgagat
gaaggctgcaagctggtgaccatcggaagtggcaaagtatttgcaaccactggatatggg
attgccattcagaaggactcagggtggaaaaggcaggtggatcttgcaattcttcagttg
tttggtgatggggaaatggaagagttggaggctctttggctgactggtatctgtcacaat
gaaaagaatgaggttatgagcagtcagctggacatagataacatggcaggagtcttctac
atgctggccgctgccatggcgctgagtctcattacatttataatggagcatctcttcttc
tggcaactgcggcactgcttcatgggagtctgctcaggaaagccaggcgttgtgttctcc
atcagcaggggaatctacagctgcattcatggagttccaatagaggacaggcagtctgca
atgaactctccttcagccacaatgaacaatactcattccaacattctccgtctcctccgc
actgccaaaaacatggcaaatctttctggggtaaatggttctccgcagagtgctttggac
tttatacggcgggaatcttcagtctatgatatctcagaacatcggcggagtttcactcac
tctgactgtaagtcatttcagccagaagaaaatctttttagtgattacatctcagaggtg
gagaggacctttggtaaccttcagcttaaagacagcaatgtgtatcaagatcactttcat
caccatcgccctcacagtatagggagcaacagctctattgatgggctgtacgactgtgat
aatgctccttttacaacacaacccagatctctgtccaagaaacctttagatataggcttg
ccatccaagcactcctcaacacaaattggtgatctgtatggcaaattttcttttaagagt
gatcgttatggtgcccctgatgacttaattagatctgatgtttctgatatatcaacacat
actgttacctatgggaatatagaaggcaatgctaagagaaggaaacagtataaggacagc
ctgaaaaagcgcccagcatcagccaaatctcgacgggaatttgatgaaattgaattggct
tatcgtaggcgtccaaggtctccagatcacaagcgctatttccgggacaaagagggcctg
agggatttttatttggatcagttcaggaccaaggaaaacaatccacactgggaacatgta
gacctaacccatatctacccagaaagagcagaagattttaaacatgaaacttcttgcgca
aacaggcagcaccagaagcatgggggggagtttgtacaaaatgaacgtaaacatggccct
ggaggaaatgcctgggagaaaaacatgagcaatgtggaatgggaagatagaacctcaagc
aacttctgtcgtaactgtccttcaaagatgcataactacacagggcaaaacactaaccgc
caagcttgtattcgttgtgaagtctgcaagaaagcaggaaacctatatgacatcagtgag
gacaattctttgcaggatctggatgctcgacccattcctgctgccaactctaaatatcca
cagagtccttctaatggcaaggctcagaaacgaaacagaagcaaactccaccgccagcat
tcttatgacacatttgtggaccttcagaaagaagatgttactttagctccccgtagtgtt
agcctgaaagataaagaacgcttcttggatggtagcccttatgcccatatgtttgagatg
cccaatgagacctccttcaccagcaagtcccatggcccaagccacaatcctgggggatac
atgctcagtcgttccttgtacccagatcgggttacccaaaacccattcattcccacattt
ggggatgaccaatgtctgctgcatgggagcaagccctactactttaggcaacccgccatt
ggtggcttgaaaggaagggcggacttccgtggggctggaaaatcactttcttctctacat
tcaggccctccaggccatttccaaaaagacatttgtatagggaatcaacccaatgcctgc
gtttcaaacaataagaaccccaggtctttcaacaattctaccaatggccatgtgtacgag
aaattgtccagcattgaatctgacgtctga
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