Xenopus tropicalis (tropical clawed frog): 100490625
Help
Entry
100490625 CDS
T01011
Symbol
fgd3
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100490625 (fgd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100490625 (fgd3)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
100490625 (fgd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
PH_13
PH_11
RHG20_PH
Ribosomal_L32p
PH_16
Motif
Other DBs
NCBI-GeneID:
100490625
NCBI-ProteinID:
XP_002941783
Xenbase:
XB-GENE-995891
UniProt:
A0A6I8S184
A0A1B8Y3W3
LinkDB
All DBs
Position
4:150903024..150981882
Genome browser
AA seq
755 aa
AA seq
DB search
MEQGTSPLCCPHVSARDSGSESGVPLGEPGRTAEEEPTAELPMDNLKMRDLTINDINNRG
GNNASVNRTERPPQENGNLTVDHNDNGKIPNRDSGIDSPSCSVVGEGFSNDESAEPKKLS
LPVHMVEIGIVRKNSDSSSVDQKRDSTQDEDSDLDEGSSEEHEAMEVPKAESVDPTKCSE
QQRLYNIARELLQTEEAYVKRLDLLDQVFCTRLLSAGVPQEVINGIFSNISSIYRFHYQF
LLPELKARIMQEWDTNPRIGDILQKLAPFLKMYGEYVKNFDKAMDMVNSWTQRSSTFKEV
VHTIQKDPVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPDDSPDRKDSEKSLELISTA
ANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTTQDRYLYL
FNSMLLYCVPKLRLMGQKFSVREKIDIAGIQVQETVKNNSPHMFQIIGKKRSLELQARTE
EEKKEWIQVIQATIEKHKQNSETFRAFNSSFSRDDEHCPDSPVPGTGPPDYSSGMDGCSS
PGGADSFRKSCKIKREKEKQNCKGCGESFNSITKRRHHCKQCGAVICAKCSEFKLLAENS
RHNRVCKECFPLVSSVSGSPGGTTESGDTKKKVEKQNSLSPENCVFSSSLLFLEKGRTWT
KVWVSVPRNEPLVMYLQGGSQDGRPPRAIPLPGYEVGLPSAGDKVDLKHVFKLSQSQQVL
FFGAEDEDLLQKWKGILSKASRGDPPIVAEDPEKL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagggacgagccccctgtgttgcccccatgtttctgcgagggactcggggtcg
gagagtggggtccctttgggggagccgggcaggacggcggaggaggaacccactgcagag
ctgcccatggataatctcaaaatgagagaccttacaataaacgatattaacaaccgcggg
ggtaacaacgcctctgtgaacaggactgagcgccccccgcaagagaacggaaacctgacc
gtcgatcacaacgacaatgggaaaattcccaacagggacagcggcatcgacagcccttcc
tgcagcgtggtcggggaggggttctccaacgacgagagcgccgagcccaaaaagctctcc
ctgccggtccacatggtggaaattgggattgtccggaagaactcggactcgtcgtctgtg
gatcagaaacgggactcgacccaagatgaggacagcgacctggacgagggcagcagcgaa
gaacatgaagccatggaggtgcccaaggcagagagcgtcgatcccaccaaatgttctgag
cagcagagactgtacaacatcgccagagagctgctacagacggaggaggcgtatgtgaag
aggctggatctgctggatcaggtgttctgcacaaggttgttatctgccggggtcccccag
gaggtgatcaatggaatattctccaatatatcctccatctatcgctttcactatcagttc
ctccttcccgaactaaaggcgagaataatgcaagagtgggatacgaacccgcggatcggg
gatatcctacagaaactcgccccgttcctgaagatgtacggggaatacgtcaagaacttc
gataaagcgatggatatggtcaacagctggacccagcgctcttctacctttaaggaggta
gttcatacaatacagaaggacccggtgtgcgggaacctgaccctgcagcaccacatgttg
gagccggtgcagaggattccccgctacgagctgctcctgaaggattatctgaagaaactc
ccagacgactctccggatcgcaaggattcagaaaagtccctggagttaatttctactgcg
gccaatcactcaaacgcagccatccgcaaaatggagaagatgcacaaactgctggaggtg
tatgagcgactcgggggggaggaggatatagttaatccggccaatgagctcattaaggag
gggcacatacagaaactgtcggcgaagaacgggaccacgcaggaccggtacctgtacctg
tttaacagcatgctcctgtactgcgtccccaagctgcgcctcatgggccagaagttcagc
gtccgggagaagatcgacatcgccgggatccaggtacaggagaccgtgaagaacaattcc
cctcatatgttccagataatcggcaaaaagagatccctggagctgcaggcgaggacagag
gaggagaagaaggaatggatacaggtcatccaagccacgatcgagaagcacaaacagaac
agcgagaccttccgggcgtttaacagttccttttccagagacgatgagcattgccccgat
tccccggtgccgggcacgggccccccggattattcctcagggatggacggctgcagctct
cctggaggggccgattccttccggaaatcctgtaagataaagcgggagaaggagaagcaa
aactgcaagggctgcggggagagtttcaactccataacgaagcgcaggcaccactgcaag
caatgcggcgccgtgatttgcgcaaagtgctcggagttcaagctgctggcggagaacagt
cggcataaccgggtctgtaaggagtgtttccctctcgtctcctctgtctcggggagtccg
gggggcaccacagagtcgggggacacaaagaagaaagtggagaagcagaattccttgtct
ccggaaaactgtgtgttcagcagtagcctcctgttcctggagaaggggagaacgtggacg
aaagtgtgggtgtcggtgcccaggaacgagcccctcgtcatgtatctgcaggggggcagc
caggatgggcggcccccccgggcaataccgttgccaggatacgaagtgggtttgccaagc
gccggtgacaaagtggacttgaaacacgtatttaaactgtcgcagtcgcagcaagttctg
ttcttcggggcggaggatgaggatttgctgcagaagtggaaggggattctcagtaaagcc
tctcggggggacccccccattgtggcagaggatccagaaaagctctag
DBGET
integrated database retrieval system
