Xenopus tropicalis (tropical clawed frog): 100490648
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Entry
100490648 CDS
T01011
Symbol
pdx1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100490648 (pdx1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100490648 (pdx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2_assoc
Motif
Other DBs
NCBI-GeneID:
100490648
NCBI-ProteinID:
XP_002934065
Xenbase:
XB-GENE-483331
UniProt:
F7DWT6
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All DBs
Position
2:complement(155135126..155160424)
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AA seq
271 aa
AA seq
DB search
MNTDDQYYPQAPLYKEPCAFQRSQAQDYNPSPPACLYMGRQQQAAYSNPLVALDPGSPPD
ISPYEVPPISEEPIVPHLHHHHHHHHHHHPGIPHPHQQMPFPDDTESATLEERNRTLLPF
PWMKSTKSHTWKGQWTGGSYIMEQEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVEL
AVMLNLTERHIKIWFQNRRMKWKKEEDKKRGRGSDPEQDSVVSSADVIKDEPQCLGNSQN
TGDLVRSSALPTSPQSNPIPATGSLRQAEKR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgatgaccaatattatccccaagctccactttacaaagagccttgtgcgttc
cagaggagtcaggcgcaggactataacccaagccccccagcatgcctttacatgggaagg
cagcagcaagcagcctacagcaaccccttggtagctctggaccccggcagtcctccagac
atctcaccgtatgaagtgccgcccatatccgaagagcccattgttcctcacctccatcac
catcaccaccatcatcaccaccatcacccagggatccctcacccccaccagcaaatgcca
ttcccagatgacactgaatctgcaacattagaggaacggaatcgaacccttttacctttc
ccatggatgaaatctaccaaatcccacacctggaaaggacagtggacaggtggatcatac
ataatggaacaagaggagaacaaaagaacaaggacagcctacacaagagcccagctgctg
gagctagagaaggagttcctcttcaacaaatacatctcgagaccacggagagtagagctg
gcagtcatgctgaacctgacagagagacacataaaaatctggttccagaaccgaagaatg
aagtggaagaaggaggaagataaaaagagaggaaggggcagcgacccagaacaagactct
gttgtgtcctctgctgatgtgattaaagatgagcctcaatgtcttggaaactcccaaaac
acaggggacttggtccgttcttctgctctgccaacttcgccccagtccaatcccattccc
gctaccggatccttgcggcaggcagaaaaacgatag
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