Xenopus tropicalis (tropical clawed frog): 100490714
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Entry
100490714 CDS
T01011
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
xtr04145
Phagosome
xtr04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100490714 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100490714 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100490714 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100490714 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100490714 (scarb1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100490714 (scarb1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100490714 (scarb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
100490714
NCBI-ProteinID:
XP_002935333
Xenbase:
XB-GENE-494666
UniProt:
F6U1H4
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Position
1:160155427..160213812
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AA seq
505 aa
AA seq
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MAGVGNKKSIVFGVLGVLLVGVGTLLVFLVPVIMDEQVEKNVRIDPSSGFAYEMWRDLPV
PFYMSIYIFEVVNHKEVLLGEKPQLQERGPYVYREYKKKQNITFNENGTVSFVEFRTFHF
DPEKSNGKEEDHVIVPNILVLGSSVMLQDLGIAIKWIISGAFSAFNEEAFINKTVKDILW
GYEDPFLDFLNTFLPGKLPFKGKFGFFSDFNNSNTGVFTVNTGMEDISRVQMVDNWNGLK
KVDFWNSEQTNMINGTAGQMWPPFRKPSEPLEFYSPDACRSMKLVYEKEEKFRGIPTFRY
TAPNYLFANGSDYPPNEGFCPCVASGVQNVSACRFNAPLFLSFPHFYNADPGFLESVEGL
HPTEELHSLFLDMHPLTGIPMNCSIKMQLNMLTKSVSGIMQTGQIKPVILPVLWFAESGH
LDGPVYNTYYNILILMPIVLEYLQYVLIGIGLCFITVALVLPFVKQGKCFLFWNSNKNVD
ESQEFKTQKEKLTAPNGIVLLEARL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtgggcaataagaagtccatagtgttcggggtgctgggggtgctcctagta
ggtgttggtactctgctggtgttcctggtgccggtgatcatggatgagcaagtggagaag
aatgtgcgcatcgatccttccagtgggtttgcatatgaaatgtggcgagacctacctgtt
ccgttctacatgtccatctacatttttgaagttgttaaccataaggaagtgctattagga
gagaagccacaattacaagaacgcggaccatatgtgtacagggagtacaaaaaaaagcaa
aatatcaccttcaatgaaaatggaacagtttcattcgtggagtttcgcaccttccatttt
gatcctgaaaaatctaacggcaaagaggaggatcatgttatagtgccaaacattctggtt
ttgggctcatctgtcatgttgcaggatttgggaatagcaataaaatggattatcagtgga
gcattttccgctttcaatgaggaggcctttattaacaaaaccgtgaaggatatattgtgg
ggctacgaagacccattcttggatttcctaaacacgtttctacctggaaaacttcccttc
aaaggaaagtttggctttttttcagattttaataactcaaatactggagtatttacagtc
aacactgggatggaagatattagcagagtccaaatggtagacaactggaatggactgaaa
aaggttgacttttggaattcagaacaaacaaatatgatcaatggaactgcaggtcaaatg
tggcctcctttcaggaaaccctcagaacctctagaattttatagtccagatgcttgccgg
tcaatgaaactggtatatgaaaaggaagaaaaattcagaggtatacctacatttcgctac
actgcccccaattacctatttgccaatggatccgactacccacccaatgagggattctgc
ccctgtgtggcttctggagtccagaatgtcagcgcgtgtcgtttcaatgccccattgttt
ctctcattccctcatttctacaatgccgatccaggctttttagagtctgtagaggggttg
catccaactgaagagctgcattcccttttcctagacatgcatccactgacaggaatcccg
atgaactgttcaattaaaatgcaactcaacatgctgactaaatctgtgtctggaataatg
caaactggacagataaaacctgtgattctaccagtgctttggtttgcagagagtgggcac
cttgatggcccggtgtacaacacttactacaacatcctgatcctcatgcccattgtactt
gagtacctacaatatgtgctcattggcattggcctctgttttattacggttgcactcgtt
cttcccttcgttaaacagggcaaatgcttcttattttggaatagtaataaaaatgttgat
gaaagtcaggagtttaaaacccaaaaagaaaagttgactgctcctaacggaattgtacta
ctggaagccagattatag
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