Xenopus tropicalis (tropical clawed frog): 100490720
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Entry
100490720 CDS
T01011
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
xtr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100490720
04082 Neuroactive ligand signaling
100490720
04519 Cadherin signaling
100490720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100490720
Ion channels [BR:
xtr04040
]
Ligand-gated channels
GABA-A
100490720
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100490720
NCBI-ProteinID:
XP_031762346
Xenbase:
XB-GENE-5799638
UniProt:
A0A8J1K0X0
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All DBs
Position
7:complement(27509585..>27530999)
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AA seq
409 aa
AA seq
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SSVNAEGKEGEILPPTIQKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTA
TIFLRQRWTDERLCFESNKSLSLDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYP
NGTVLYALRITTTVACSMDLTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLDA
LRLAQYAVEDHYTSVSEAVYETGRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSF
WISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEY
AIAHFYTLHQPHQKNSTIKKLVAEDEADMNGTISAVSDGQSHQTEPPDEIGNGKKKIKSP
VDPVLKRLLCVFYCFQVQNPHDIDNYSRISFPLSFMIINVFYWAYYLYF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
tcatctgttaatgctgaagggaaggaaggtgagattctgcctccaactattcaaaagctc
atgaaaggatacaacaaatacctgcgcccattttttgacaatgggcctgttacagttgga
atgagcttggacattgccagcatcgacacaatatcagaaattaacatggattacacagcg
actatatttctaaggcagcgctggacagatgaaagactttgctttgaaagcaataagagc
cttagtttagatggccggctggtggaattactttgggtaccagacacatttatagtagat
tcgaaaaagtcttttctgcacgacatgaccgttgaaaatcggctaattagaatttatcca
aatggaacagttctttatgcattaaggataaccacaacagttgcgtgtagcatggaccta
actaagtatccgatggacaaacaaacatgtactttgtaactggaaagctggagttacaac
actaatgacgttatgttttactggacaaggggaaatgattctgttcgaggactggatgct
ctgcgtttggcccaatatgcagtggaagatcattacacatctgtgtctgaagctgtgtat
gaaactggtcgttatccaaagcttgtgtttcattttgacctgaaaagaaacattttgtat
ttcatccttgagacatacgtaccatccatcctgctggttgtcctctcatgggtgtccttt
tggataagtctgtcatctgtgccagctaggatatgtataggtgtaacaacagtcctaacc
atgacaacacttatgatgggagccagaacatctctgccaaatgccaactgcttcataaag
gcaatagatgtctaccttggaatctgcttcagctttatattcggggctttgttagaatac
gccattgctcatttttatactttgcatcaaccacaccaaaagaattccactataaagaaa
cttgttgctgaagatgaagccgacatgaatggtacaataagtgctgtgtccgatggacaa
agtcaccaaacggaacctccagatgaaatcgggaacgggaaaaaaaaaataaagagtccg
gtggatccagttctgaaacgattgctctgtgtattttactgttttcaagtgcaaaaccca
cacgacatagacaattattccaggatatctttcccgctgtcctttatgatcataaatgtt
ttttattgggcatattatttgtatttttga
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