Entry |
|
Name |
(RefSeq) tRNA pseudouridine synthase A isoform X4
|
KO |
|
Organism |
xtr Xenopus tropicalis (tropical clawed frog)
|
Brite |
KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:xtr03016]
100490752
Enzymes [BR:xtr01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100490752
Transfer RNA biogenesis [BR:xtr03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100490752
Prokaryotic type
100490752
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:106658931..106674674
|
AA seq |
394 aa
MGRITLSHLRSWERCHSAFTSIYKADEMACQSMAKNKEDVPHEELDPAGTINASVEVLEN
NSNIQIPKRKFAIMLAYCGRGYYGMQMDLTRPNFPTIESALISALIQARCIPEMFYMQMK
QLKFQRCARTDKGVSALSQLVSVRLLPSCSNPVEKINSHLPPEILIIDMKRVTKGFCPKK
MCDKRSYSYMVPTFALSCCAPSVPDSNFRMPREDFHNINNLLSFYKGTHNFHNFTSRKAF
EDPSSFRHMLDVSCSEPFVFHGTEFAQIHITGQSFMLYQIRKMVGLIIAIAQGIVPADFL
PQCMQREKINIPPAPGLGLVLERVHFDWYNKRYGGDGFHQPISWEKSMPTVSVFWEERIL
PDILEGELENLSMSYWIEKLNRHNFLMFQNYKEV |
NT seq |
1185 nt +upstreamnt +downstreamnt
atgggaaggattacattatcgcatctccgttcctgggaaagatgccactctgcttttact
tccatctataaggctgatgagatggcatgtcagagcatggcaaaaaataaggaagacgtg
ccacacgaggagctagaccccgcaggtaccataaatgcatctgttgaagttttagagaat
aatagcaacatccagattcccaagaggaagtttgccattatgttggcctactgtggtcgt
ggttattatggtatgcagatggaccttacaaggccaaactttccaaccattgaatctgcc
ctgatttctgctctcattcaggctcggtgcattcctgagatgttctatatgcaaatgaag
caactgaagtttcagcggtgtgcccgtactgacaagggagtatctgctttgagccaactg
gtatcagtaagactcctaccatcttgctctaacccagtggagaaaatcaattcacatctt
cctcccgagatcctcattatagatatgaaaagagtaactaaaggattctgccctaagaaa
atgtgtgataagcgatcttactcttacatggtgcccacatttgcactttcttgttgtgct
ccctctgtacctgattcaaacttccgaatgcctagggaagactttcacaacatcaacaat
cttctatctttctacaagggaacacacaattttcacaattttacatccaggaaagcgttt
gaggatccaagctcttttagacatatgttggacgtgtcatgctcagaaccttttgtcttt
catgggacagagtttgctcaaattcacattactggtcaaagcttcatgctgtaccaaatt
cgtaaaatggtgggtttgattatagctatcgcacaaggcattgtcccggctgattttcta
cctcagtgcatgcagagggagaagatcaacatccctccagcacccggacttggcttggta
cttgagcgtgttcattttgattggtataataaaagatatgggggagacggctttcaccaa
ccaatttcctgggaaaagtctatgcctactgtgtcggtgttttgggaggaaagaatattg
ccagacatacttgaaggagaactagaaaatctttccatgtcttactggatagaaaaactt
aatcggcacaattttctcatgtttcaaaattacaaagaagtttaa |