Xenopus tropicalis (tropical clawed frog): 100490904
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Entry
100490904 CDS
T01011
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100490904 (nop2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100490904 (nop2)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100490904 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
PCMT
Methyltransf_25
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
100490904
NCBI-ProteinID:
XP_002941729
Xenbase:
XB-GENE-962291
UniProt:
A0A8J0R5R7
LinkDB
All DBs
Position
7:complement(10045505..10054076)
Genome browser
AA seq
749 aa
AA seq
DB search
MGRKLDPLRKVPRGPGRKARKQHGAENELKNILQEDTEAKRMSSRGRKRALKRRMLQEQK
AAAKPPAKSNANAKLKIGEKKVLPGFTDDNAEWLKPVKRARKEEDEESEDDSEEDNEEEE
EGDEMEEVENGMEEEVDEEMEEKSDEREDAEEESEDEDGDDEEEEDGDEEEDGDGEFGES
LSLSDSDDLQDDYGTSSGDEKDLLPIERASKKEKKKQKSEEALTGEESTIQLNVDSEELF
QLPTEEELEKELSTAPDLVTVQERIKDIVGVLQNFAQRGGGRTRQEYLKVLKKDLATYYS
YGDYMIETLSELFPVSELVDFLEACEVQRPITIRTNTLKTRRRDLAQALINRSVNLDPLG
KWSKTGLVIYDSSVPIGATPEYLAGHYMLQGASSLLPVIALAPQENERVLDMCCAPGGKT
SYMAQLMKNTGIVVANDMNADRLRSVVGNLHRLGVTNCIISNYDGRQISKVLGGFDRVLL
DAPCSGTGIISKDPAVKTNKSVQDVQRCAHIQKELILSAIDALDAQSQTGGFMVYCTCSI
TVEENECVVDYALKKRNVKLVPTGLDFGKEGFVRFKERRFHPSLRQARRFYPHTHNMDGF
FIAKLRKFSNTIPKPNKDEETETPSPDQLNEDKATKQKATKRKAPEENDVKDNTAKKEGG
NEKMPKKKGGNEKTPKKGGNVKAPKKKGGNEKAAKEKGANEKEPEKKAQKKKVAIKKAHM
KKAVKVTGNKNKKKVASKKKKMFKKKTNK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggaaattagacccgctgaggaaggtgcctcgtggcccaggccgtaaagcaagg
aagcagcatggggcagaaaatgagctaaagaacatcctgcaagaggacacagaagcaaag
cgcatgtccagccgcggcaggaagagggcactaaaaaggcgcatgttacaggagcaaaaa
gcagcagccaaacccccagcaaagagcaatgccaatgcaaagctcaaaataggcgaaaag
aaagtcctgccgggatttactgatgacaatgcagaatggctgaagcctgtgaaaagagct
cgcaaggaagaagatgaggaaagcgaagatgatagtgaggaggataatgaagaagaagaa
gagggggatgaaatggaggaggtagagaatgggatggaggaggaggtagatgaagaaatg
gaagagaagagtgatgagagggaagatgcagaagaggaaagtgaagatgaggatggtgat
gatgaggaggaggaggatggtgatgaggaggaggatggtgatggtgagtttggcgaatcc
ctctccctgtcagacagcgatgatcttcaggatgattatggaacctcgtcaggggatgag
aaggatcttcttccaatagagcgggcatccaagaaggagaaaaaaaaacaaaaaagtgaa
gaagctctgacaggagaagagagcaccattcagttgaatgtagattccgaagaactattt
cagcttccaactgaagaagagttggaaaaggagctctcaactgccccagatcttgtcaca
gtgcaggagcgcattaaggatatagtaggagttctgcagaatttcgcacagcgcggggga
ggtcggacgcggcaggagtacctcaaagtgctcaagaaagatctcgctacctactacagt
tacggagattacatgattgagacgctcagtgaacttttccctgtgtcggagctagtagat
ttccttgaggcttgtgaagttcagcgaccgataacaatcaggaccaacactttaaagaca
agaagacgtgaccttgctcaggctctcattaaccgcagtgtaaatttggatcccttgggt
aaatggtcaaaaactggacttgttatttacgactcttccgtgccaattggtgccacccct
gagtacttagccggacattacatgctgcaaggtgcgtctagtcttttaccagtcatcgcg
ctggctcctcaggagaatgagcgggtgttggatatgtgttgcgcacctggcggcaagacc
agctacatggctcagctgatgaagaacacaggtatagtcgtggccaatgatatgaatgca
gaccgactgcgcagtgttgtgggcaatcttcaccggctgggggtgacaaactgcatcatc
agcaattatgatgggcggcagatatccaaggtgttagggggctttgacagagtgctcctt
gatgctccgtgcagtggtaccgggattatcagcaaggatcctgccgttaaaacaaataag
agtgtacaggatgtccagcgttgtgcccacatacagaaggaactgattctcagtgctatt
gatgctctggatgcccagtcacagactggcgggtttatggtgtattgtacctgctccata
acggtggaggaaaatgaatgtgtagtggattatgctttaaagaagagaaatgtcaaactt
gtcccaacaggactggattttggaaaggaaggttttgtcaggttcaaggaacggcgattt
cacccatcgctgcggcaggcacgaagattttacccacacactcacaatatggacggcttt
ttcattgcaaagctgcgcaagttctccaacaccatccccaagccaaataaagatgaagag
actgagacccccagcccagatcagctgaatgaggacaaagccacaaagcagaaagctaca
aagaggaaagctccagaggagaatgatgtgaaggacaacacagcgaagaaggaagggggg
aatgagaagatgccaaagaagaaaggggggaatgagaagacgccaaagaaaggggggaat
gtgaaggcgccaaagaagaaagggggaaatgagaaggcagcaaaggaaaaaggggcaaat
gagaaggaaccagagaagaaagctcagaaaaagaaagttgcaataaagaaagctcatatg
aagaaagctgtgaaggtgactggcaataaaaataagaagaaagtagcatcaaagaagaaa
aagatgttcaaaaagaaaacgaataaataa
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