| Entry |
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| Symbol |
acan
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| Name |
(RefSeq) aggrecan core protein isoform X1
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| KO |
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| Organism |
xtr Xenopus tropicalis (tropical clawed frog)
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| Brite |
KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:xtr00535]
100491091 (acan)
00536 Glycosaminoglycan binding proteins [BR:xtr00536]
100491091 (acan)
04091 Lectins [BR:xtr04091]
100491091 (acan)
Proteoglycans [BR:xtr00535]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
100491091 (acan)
Glycosaminoglycan binding proteins [BR:xtr00536]
Hyaluronan
Extracellular matrix or blood plasma proteins
100491091 (acan)
Lectins [BR:xtr04091]
C-Type lectins
Lecticans
100491091 (acan)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(109814104..109880610)
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| AA seq |
1683 aa
MTTLLLVFVCLRVIAAAISVEVSDHHNALSVIIPVEAPLKVQLGHSLTIPCFFINALEDV
TVAPSTAPLTPRIKWSKHVKGKETVLLVATDGHVRVNDIYQGRVSMPTYPLAPTDVSLEI
SNILSNDSGIYRCEVMHGIEDSQATVEVNVKGVVFHYRAISTRYTLDFENAKKACIQNSA
TIATPEQLQAAYDDGYHQCDAGWLSDQTVRYPIHNPREACYGDKDMFPGVRTYGVRETDE
TYDVYCYVEDMQGEVFYATSPEKFTFDEAEKQCKSLGARLATTGELYVAWKSGMDMCSAG
WLGDRSVRYPISFARPNCGGNLVGVRTVYLHPTNQTGYPNPLSRYDAICYKAGPDEEITI
QTITQPSLEIILPRNETEEEARGSIASLEPTDFTLTPTDFEEFFTATPELVLTEGPFENV
TEEVFPLENITASLQTEAPGTADVTFSEGPEFNATTSLGEQIVPATAAPAEAGPEKDISK
TGVVFHYRAASSRYSLNFTEAKQACLDNNAIIASPAQLQAAYEAGFDQCDAGWISDQTVR
YPIVTPRENCHGDKNGFPGVRNYGVVNPNAHFDVYCYIDKLHGEVFFATQPDQFTFQEAK
EFCDGQNASLASTGQLYMAWRLGLDKCRAGWLSDGSVRYPVVTPRRACGGDVPGVRTVYI
HPNQTGFPDPLSKYHAFCFREEIPGFPSIEEELIVPEVVPEVEKLPSGEGPTSEIETVTE
FENQTDMWLANVTVIPTIDSSVTVSPSVVPIVSPDPEDISGETSAIGSGVSGELSGLPSG
VSSGDVSGADLSGQPSGAEESGFPSGTDISGVSGLPSGDISGDISGEPDISGLPSGFPSG
VEDISGQGSGVPDISGLSSVPIETSGLPSGEPSGDEIISGSASGIEIISGLFSGTEDFSG
IASGFPTITHVDTTWEEAVTKPTETELEGKGEIELSASGIELSGDLSGLEPSGEVSGFDL
SGVTSSVVESSGDLSGIISSGDISGEPSGIIDLSGEVSGVTDISGDLSGLKDFSGETSGI
LDFSGELSGLSGESSGIISVSGGFSGDIDFSGEISGVREISGEISGVREISGEISGVREI
SGELSGVPDISGSASGILEIPSGVFLIDQALTELSQPSTKEEEGKGSVGISGFYSGDVDS
SGDISGILDVSGGPSGFIDISGFVSGAVPSGDIDISGVSDISGATSGVEYVSGLQSGFDD
LSGVPTVSHIDFTLKEPPTQGPDTQEAGEGPSVILEISGISGESLPSGTHEGSLESSGIY
TSGFSQVTLVTDDTVEAITKPAVSQELGGVTFAYPIETSASGDISTEASATHETSGKQET
SLEGSTEPSSGQLTFLPPEISETSESEITHSPEEAQQETELVTSVELGEVTDEPTIEAAS
PSSLIATESEGIIGSCADQPCGAGTCTEKEGRIYCACLPGYGGELCNIDIDECHSSPCVN
GATCVDGIDSFKCLCLPSYGGDLCQIDLEVCEDGWTKFQGHCYKHFSERETWVDAENVCR
YHQSHLASILTPEEQEFVNGNAQDYQWIGLNDKTIENDFRWSDANPLQYENWRPNQPDNF
FTTGEDCVVMIWHERGEWNDVPCNYHLPFTCKKGTVACGDPPAVQNAYTLGKKKARYEIS
SLVRYQCNQGYLQRHVPIIRCLPTGHWDEPRIQCIDLTTYRRHKRNPRSRSRAIATSEQG
KAH |
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| NT seq |
5052 nt +upstreamnt +downstreamnt
atgaccactttactattagtgttcgtttgcttgcgggtcatcgctgcagcgatatccgta
gaagtttcagaccatcacaacgcactgagcgtgattatacctgtagaagctccactgaaa
gtccagcttggacattcccttaccatcccttgtttcttcataaatgctttggaagatgtg
actgtggctccctcaacagcacccttaacaccaaggatcaagtggagcaaacatgtcaaa
ggaaaggaaaccgtcctgctggtagccacagatggacatgttcgtgtaaatgacatctac
caaggccgtgtctctatgcccacctacccacttgcccctacagatgtcagcctggaaatt
tccaacatactgtctaatgattcaggaatctaccgctgtgaagtgatgcatgggatagaa
gacagccaagctacagtagaggttaatgtgaaaggtgtcgttttccactacagagcaatc
tcgaccagatatactttggactttgaaaatgccaaaaaagcctgcatacaaaacagtgcc
accattgccacccccgagcagctccaggcagcatatgatgatggttaccaccaatgtgat
gctgggtggctttccgaccagaccgttcgttatccaattcataatccacgtgaagcctgc
tacggagacaaggacatgtttccaggagtgagaacatatggagttcgcgaaacagatgaa
acatatgatgtgtattgctatgttgaggatatgcagggtgaagtgttttatgcaacatct
cctgaaaagttcacctttgatgaagcagaaaagcaatgtaagagccttggtgccagattg
gccacaactggagagctctatgtggcatggaaaagtggaatggatatgtgcagtgcgggt
tggttgggagaccgcagtgttaggtaccccatatcctttgctcggccaaactgtggtgga
aatttagtaggcgtaagaacagtttatctccaccccaccaaccagactggatatcctaat
ccactatctcggtatgatgctatctgctacaaagctggaccagatgaggaaatcactatt
caaaccattacacagccaagtttagagatcatccttccccgtaatgagacagaagaggag
gctcgtggcagtattgcttctcttgaaccaacagactttacccttacacctactgatttt
gaggaatttttcacagcaacccctgagcttgtgctaacagaagggccatttgaaaatgtc
acagaagaagtatttccccttgaaaatattacagcatcactccaaacagaagcccctggt
acagcagatgtgacattctctgagggtccagagtttaatgcaacaacatctttaggagag
caaatagttcctgcaacagctgctcctgctgaagctgggccagaaaaagacatttctaag
actggtgttgtctttcattaccgagctgcttccagtcgatattcccttaacttcaccgag
gctaaacaggcatgtctggacaacaatgctatcattgcaagccctgctcagctccaggct
gcctatgaagctggatttgatcaatgtgatgctggatggatatcagaccaaactgtcaga
tacccaatagtcactccaagagaaaactgtcatggagacaagaatggatttcctggggtt
agaaattatggagtggtaaacccaaatgcacattttgatgtgtactgctacattgataaa
cttcatggagaggtgttttttgccactcaaccagaccagtttactttccaagaagcaaaa
gaattttgtgatggacaaaatgcctcattggcctccactggacagctctatatggcctgg
aggttggggttggacaagtgtagagcaggctggttgtcagatggaagtgtccgctacccc
gttgtgacacctcgcagagcctgtggaggagacgtacctggagtgcggacagtctacatt
catcctaatcaaacaggattccctgatcctctgtcaaaataccacgccttttgtttccga
gaagagattccaggttttccatcaattgaggaggagcttattgtgcctgaggtagtccca
gaagtagagaaattaccttctggagaaggaccaacttccgaaattgagactgtgactgaa
tttgaaaatcagacagatatgtggctggcaaatgtcactgtaattcctactattgattca
tcagtaacagtcagtccttcagttgttccaattgtgagcccagatccagaagatataagt
ggagagacatcagcaataggcagtggagtaagtggagaactatctggattgccatctgga
gtatctagtggagatgtgtctggtgctgatctaagtggacaaccatcaggagctgaagaa
agtggatttccatctggcactgacatttctggagtgagtggactgccatctggtgacata
tctggtgacatatcaggtgaacctgatattagtggactgccatctggatttccttcagga
gttgaagacatatcaggtcaaggttctggagttccagatataagtgggttgtcttctgta
ccaattgaaacaagtggtctcccttctggagagccatctggagatgagataattagtggt
tcagcttctggaattgagataattagtggccttttttctggtacagaagatttcagtggc
attgcctcaggcttcccaacaattacacatgtagatacaacttgggaagaagctgttaca
aaaccaacagaaactgaactagaaggaaagggagaaattgaattaagtgcatcaggaata
gaattaagtggagatctttctggcttagagcccagtggagaggtctctggatttgacctt
agtggggttacttcatcagtagtagaaagcagtggagatctctctggaattatttctagt
ggtgatattagtggagagccatcaggtataattgatttgagtggtgaagtgtcaggagta
actgatattagtggagatttgtcaggattaaaggattttagtggtgagacatcaggaata
ttggattttagtggtgagctatctggcctaagtggagaatcatcaggaattatttctgta
agtggtggattttctggagatatagattttagtggggagatttctggagtaagagagatt
agtggggagatttctggagtaagagagattagtggggagatttctggagtaagagagatt
agtggggagctttctggagttcctgacatcagtggctcggcctccggtatcttagagata
ccatcaggtgtttttcttattgaccaagctttgacagaactctctcagccatcaacaaaa
gaagaggaaggaaaagggtctgttggaataagtggcttttattcaggagatgttgacagc
tctggagacatatctggcatcttggatgtcagtggtggaccttcaggttttatagacatt
agtggttttgtttcaggggctgttcctagtggtgatatagatattagtggtgtatcagac
ataagtggtgcaacatctggagttgaatatgttagtggcttacaatctggatttgatgat
ctaagtggagtccctactgtttctcatattgatttcacattaaaagagccaccaactcaa
ggtcctgatactcaagaagcaggagaaggtccatcagtaatacttgagatcagtggaata
tctggagaatctttgccatcaggaactcatgaaggcagtctagaaagttcaggcatatat
acatcaggattttctcaagtcacacttgttactgatgatactgtagaagccatcacaaaa
ccagcagtttcacaagagctaggtggtgttacttttgcatacccaatagaaacatcagca
tctggtgatattagcaccgaggcatctgcaactcatgaaaccagtggaaaacaagaaaca
tctctagaaggaagcactgaaccaagctctggacagctgacatttttgccaccagaaata
tctgaaacatcagaatctgaaataactcattctcctgaggaagcacaacaggaaacagaa
ttagttacttcagttgaactgggtgaagtaacagatgaacccacgattgaagcagccagt
ccttcaagtctaattgcaactgagtctgaaggaataattggatcatgtgctgatcaaccc
tgcggagctggaacatgtacagaaaaggaaggaagaatatactgtgcctgcctgccaggc
tatggtggagaactttgtaatatagacattgatgagtgccactcaagcccctgtgtgaat
ggagctacctgcgttgatggcatcgactcattcaaatgcttatgccttcccagctacgga
ggggacctatgtcagatcgatctagaggtgtgtgaggatggatggaccaagttccagggt
cactgctacaaacacttttcagagagagaaacttgggtggatgcagaaaacgtctgtcgg
tatcaccagtcccatctagcgagcattctcacacctgaagagcaagaatttgtgaatggt
aacgctcaggactatcaatggattgggctgaatgataagacaattgaaaatgatttccgc
tggtcagatgcaaaccccttgcaatatgaaaactggaggccaaaccaaccagataacttc
ttcaccacgggagaagattgtgttgttatgatctggcatgaacgaggagaatggaatgat
gttccctgtaactaccacctgccatttacatgcaaaaagggaacagtggcttgtggtgat
cctccagcagtgcaaaacgcctacacactaggaaaaaagaaagcacgttatgaaatcagc
tccttagtgcggtatcaatgtaaccaaggctacctacaacgccatgttcctataatccga
tgtctaccaactgggcactgggatgagcccaggatacagtgcatagatcttaccacttac
agacgacacaagagaaaccccagaagtcggtcgagagcaattgccacatctgaacaggga
aaggcccattaa |
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