Xenopus tropicalis (tropical clawed frog): 100491160
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Entry
100491160 CDS
T01011
Symbol
cdh7
Name
(RefSeq) cadherin-7
KO
K06799
cadherin 7, type 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100491160 (cdh7)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Major cadherins
100491160 (cdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100491160
NCBI-ProteinID:
XP_017950519
Xenbase:
XB-GENE-1012259
UniProt:
F7DV57
LinkDB
All DBs
Position
6:complement(102243477..102348109)
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AA seq
783 aa
AA seq
DB search
MKMGKHELCHYLQIIAIFFCLSGISQAELSMSTSKPYIQPGRSRTKRSWVWNQFFVLEEY
TGTDPLYVGKLHSDADRGDNAIKYVLTGEGASSIFSIDENTGDIHASKRLDREEQAYYTL
RAQALDRLTSKPMEPESEFVIKVQDINDNEPKFLDGPYTAGIPEMSPVGTSVLQVTATDA
DDPTYGNSARVSYSILQGQPYFSVEPKTGIIRTALPHMDREAKDQYLLVIQAKDMVGQMG
GLTGTTSVTVTLTDVNDNPPRFPRRSDQYYVPESLPIGSTVAKIKADDADIGVNAEMEYK
ILDGDVDGMFKITVDKDTQEGIITTKQELDYESKTSYTLRIEASNKHVDTRFLSVGPFMD
TTTVKLVVEDVDEPPVFSSRFYSMVESEAAKVGTSIGTVTAHDPDATNSPVRYSIDRNTD
LERVFNIDANSGLITIAKPLDRETNAVHNITVLAIESQNPAQIGKGFVAISILDINDNAP
EFANEYETTVCENASPGKVIQEIRAVDKDDPSSGHWFYFTLPADASNANFTLQDNKDNSA
SVVTRRGGFRRQEQSVFYLPIVIVDSGSPSLSSTNTLTIRVCDCDADGLAQSCSAEAYTL
PAGLSTGALIAILACVLTLLVLVLLIVTMRRRKKEPLIFDEERDVRENIVRYDDEGGGEE
DTEAFDMAALRNLNIRDSKTRRDVTPEIQFLSRPSIRSAPDNVIFREFIWERLKEADVDP
CAPPYDSLQTYAFEGNGSVAESLSSLESNSSNSEHNYDYLSDWGPRFKRLADMYGNGEDI
LYS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgggaaaacatgagttgtgtcattatcttcagattatagctattttcttttgt
ctttctggaataagccaagctgagctttcaatgtctacatccaagccttacattcaacca
gggaggtcaagaacaaagcgcagctgggtgtggaatcagttctttgtattggaggaatat
acaggtacagatcctctctatgtgggcaagcttcactctgatgcggatagaggagataat
gccatcaaatatgtcttgacaggggaaggggcaagttccattttcagtattgatgagaat
actggagatattcatgcttcaaagaggttggatcgggaggaacaagcctactacacactg
cgggcccaggctcttgacaggttaacaagcaagccaatggaacccgagtctgagtttgtc
attaaagtacaagatataaatgacaatgagcctaaatttctggatggcccttacacagct
ggaattcccgaaatgtctcctgttggaacgtcagtgctacaagttacagcaacagatgca
gatgatccaacatatggaaatagcgccagagtttcctacagcattcttcaaggtcaaccc
tatttttcagtggagccaaagacaggaattattcgaacagccttacctcatatggacaga
gaagccaaagatcagtatcttcttgtaatacaagcaaaggacatggtgggacaaatggga
ggattaacaggaacaacttctgtaacagtcacacttacagatgtcaatgacaacccgcca
agatttcctcgcagatctgatcaatattatgttccagaatctttacctattggttcgaca
gtggctaaaataaaagcagatgatgctgatattggggtcaatgcagaaatggaatataag
atattagatggtgatgtggacggcatgttcaaaattacagttgataaagacacccaagaa
ggaattattacaacaaaacaagagctggattatgaatcaaagacaagttataccctaagg
atagaggcatcaaacaaacatgtagatactcgttttctcagtgtaggcccctttatggat
acaacaactgtgaagcttgttgtagaagatgtggatgagccacctgtgttttcgtcaaga
ttttattcaatggtggagtcagaagcagcaaaagtaggaactagtattggaacagtaaca
gcacatgacccggatgcaaccaatagcccagtgagatattcaattgatcgtaatacggac
ctggagagagttttcaacattgatgctaacagtgggcttattaccatagcaaagcctttg
gacagagagactaatgctgtccataatatcacagtattagcaattgagagtcaaaatcct
gcacagattggtaaaggatttgttgcaataagcatactggatattaatgataatgcacct
gaatttgcaaatgaatatgagactacagtttgtgagaatgcttcccctggaaaagttatt
caggaaatacgagcagttgataaagatgatccatcaagtggccattggttttatttcact
ttgccagcagatgccagcaatgccaattttactttgcaagacaacaaggataattcagca
tcagtcgtaacaagaagaggtggatttcggaggcaggaacagtctgtgttttatttgccc
attgtgattgttgatagtggatctccatccctcagcagtacaaataccctgactattaga
gtctgtgattgtgatgcagatggtttggcccagtcttgcagtgctgaagcatacacgtta
ccagctggtttaagcactggggcgctgatagcaattttagcttgtgtcttgactttactt
gtgcttgtccttctaattgtgaccatgaggagacggaaaaaagaaccattaatatttgat
gaagaaagagatgtcagagagaatattgtaagatatgatgatgagggcggtggtgaagaa
gacactgaagcatttgacatggctgctttaagaaatctcaatattcgagatagcaaaaca
aggagggatgtgactccagaaatccagttcttgagccgaccatccattagaagtgcacca
gacaatgtcattttcagggaatttatctgggaaagattgaaggaagctgatgtggatcca
tgtgcaccaccttatgactccctgcaaacatatgcatttgaaggaaatggatctgtagca
gaatctctaagttctctagagtcaaacagctcaaactctgaacacaattatgattatctg
agtgactggggtcctagatttaaaagacttgcagatatgtatggcaatggggaggacatc
ttgtattcatag
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