Xenopus tropicalis (tropical clawed frog): 100491173
Help
Entry
100491173 CDS
T01011
Symbol
gpc6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
100491173 (gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
100491173 (gpc6)
Proteoglycans [BR:
xtr00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
100491173 (gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
Others
100491173 (gpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
100491173
NCBI-ProteinID:
XP_012812967
Xenbase:
XB-GENE-6037689
UniProt:
A0A803K187
LinkDB
All DBs
Position
2:complement(122737897..123312844)
Genome browser
AA seq
579 aa
AA seq
DB search
MFGMEPVLCWGAVLLSLCAGADVRVRSCSEVRQAYSAKGFSLASVPYQEIAAKRLLYQSQ
GFMKRRKGEHLRICPQEYTCCTSEMEDKLSQQSKLEFESLVEETSHFVRATFVSWHRKFD
EFFRELLKNAEKSLNDMFVNTYGMLYMQNTEVFQDLFTELKRYYTGGNVNLEEILNDFWA
RLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDIPRKLKVQVTRALIAARTFVQGLT
VGREVANRVSKISPNPGCIRALMKMLYCPYCRGLPSVRPCSNYCLNVMKGCLANQADLDI
EWNLFIDAMLLVVDRLEGPFNIESVMGPIDVKISEAIVNMQENSVQVSGKVFLGCGQPKS
PPLLRLSRSFSENNNVRFHPYTAEERPTTAAITSLDRLRTLWRTMQNAVIEIKDKLKVSK
KLWSSLPHAICKEVRITGENPNEDKCWNGQTRARYLPEIMNDGLINQINNPEVDVDITRP
DTFIRQQIMALRVITNKLKNAYNGNDVNFQDTSEETSGSGSGSGCTDDICPTEFDFITTE
APLFDSDRGEMDFSAGSQISQSHFTVLICVILVLQRQWR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatggagccggtgctgtgctggggagcggtgctgctgtcactttgcgccggg
gctgatgtgagagttcgcagttgcagtgaggtgagacaagcatacagcgctaagggattc
agcctggccagtgtcccctatcaggagatagcagcaaaaagacttctgtatcagtcacaa
ggattcatgaagagaagaaaaggggaacatttgcgtatctgtcctcaggaatacacatgc
tgcacttctgaaatggaagacaagttaagccaacagagcaaattggaatttgaaagcctt
gttgaagaaacaagccattttgtccgagctacttttgtgtcatggcatagaaagtttgac
gaatttttcagagaactcctgaaaaatgcagagaagtcacttaacgacatgtttgtgaat
acttatggaatgctatatatgcagaacactgaggtgttccaagacttatttaccgaactg
aaacgttactacacaggaggcaatgtcaacctggaagaaattctcaatgatttttgggca
cggctgcttgaacgcatgtttcagcttataaatcctcaatatcatttctctgaggactac
cttgagtgtgtcagcaaatacacagaccaactgaaaccttttggagatatacctaggaaa
ctcaaagttcaagttacaagagcacttatcgcagcacgaacatttgtccaaggtctcact
gtaggtcgtgaagtagcaaacagggtatccaagatcagtccaaaccctgggtgcattcgt
gccctaatgaagatgctctactgcccttactgtcgcggcctaccatcagtgagaccctgc
agcaattactgtctcaacgtgatgaaaggctgtctggccaatcaggctgacttagacatt
gaatggaatctcttcatagatgccatgctgttggtagttgacagattagagggaccattc
aatattgagtcagttatgggccctattgatgtgaaaatttctgaagccatcgtgaacatg
caagaaaacagtgtgcaggtgtcaggaaaggtctttttaggatgtggccagcccaagtct
ccaccattactacggctttcacgatcattttcagaaaataacaatgtgcggttccatccc
tacactgcagaggagagacccacaactgctgcaatcacaagccttgacagactgaggact
ttatggaggacaatgcagaatgctgttattgaaatcaaagacaaactgaaggtatcaaag
aaattgtggtcgagtttgccacatgcaatctgtaaggaagtgagaataacaggagaaaac
ccaaatgaagacaaatgctggaatgggcagactagagctcggtatctgcctgaaattatg
aatgatggacttataaatcagatcaataacccagaggtggatgtagacatcacaaggcca
gatacattcataagacagcaaatcatggcactccgagtgattacgaacaaactgaagaat
gcatacaatgggaatgatgtcaacttccaggatacaagtgaggaaaccagtggctcagga
agtggcagtgggtgcactgatgatatctgtccgactgagtttgactttatcaccaccgaa
gcaccactttttgactcagacaggggggagatggacttttctgcaggatcacagattagc
cagtcacatttcacagtgctcatatgtgtcatcctggtactacagagacaatggagataa
DBGET
integrated database retrieval system
