Xenopus tropicalis (tropical clawed frog): 100491274
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Entry
100491274 CDS
T01011
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100491274 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100491274 (rnf43)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100491274 (rnf43)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100491274 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100491274
NCBI-ProteinID:
XP_002935238
Xenbase:
XB-GENE-952685
UniProt:
P0DPR2
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All DBs
Position
2:42688968..42738288
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AA seq
689 aa
AA seq
DB search
MNRARLQLASLWLLLTVTLQAVASAMGTTEREMDVKALIRVTPLQAEESGGVGQGNLTLE
GLFARVAEISPAEGRLLQFHPLSLCNTSEDDQTKPGFISIVKLETPDRDTQPCLSLANKA
RLAGERGAHAVLFDITNDRGALQQLQQPAGINQPVVLIWGPDAEKLMDVVNKNKEALVKI
EVQEQPKWLHHDIWILLTVAGTVMFFVLYAVARLLCRQPPPQDSIQQQTLLAISRLGTRR
YQQRMLKDQRASGGWVETASTSSSVPVCAICLEEFTDGQELRILPCCHEYHLGCVDPWLR
QNHTCPLCMYDILDSGTPPRPLAHRAPSQTQLWGRYPGSARLMSHLPPHGTPMVFPTPNN
SLFLPRAPYYLDHTHHWQMPEQMAMQMRTHRRGAEGTRELGISPGCQDSSGYLPDDPGSD
SSSGPCHGSSSENCTDISLHCLHGTSSSSVHSSQSNQEDSSPPALASYLLPQGELPALNP
LLSTQASYASHVHFHQHRHHHYRRNQPSMSHSHPHRSKRRTKVSRADPSYYREHRHTTGA
NGELRSLMVRREPRPSCSRTCFDPRTNREHPRHQQSMPQAASVVQGSSEPDVATSLRGSR
TDPPSRTYRKKKSSAPSHLPLLYSPRHCHPANSVQMSESSHPRWAEEVRLLHSRVNSHRE
NTAMMHLYHPPHHNQGATEEIEAVCEHAV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagcccggctgcagctggcatccctctggctgctgctcacggtgactctccag
gcggtggcttctgccatgggcaccacggaacgggagatggatgtgaaggcgctgatcagg
gtgaccccgctgcaggcggaggagagcgggggagtgggacaagggaacctgactctggaa
gggctgtttgccagggtggcagagattagcccggcggaaggaagactgcttcagtttcac
cccctgtctctgtgcaacaccagtgaagatgaccagaccaagcctggcttcatttccatt
gtcaaactggaaactcctgatcgtgatacccagccatgcctgtccctggccaacaaggcc
cggctggcgggggagagaggagctcatgctgtactctttgatattaccaacgacaggggt
gccctacagcagttgcagcagccagctggcattaaccagcctgtggtactgatctggggc
cctgatgctgagaagctgatggatgttgtgaacaaaaacaaagaggctctggtgaagatc
gaggtgcaggagcagcccaagtggcttcatcatgacatctggatcctgctcactgtggct
ggcacggtcatgttctttgtcttgtatgcagttgcccggttactctgcaggcagccccct
ccacaggactctatacaacagcagacccttctggccattagccgtctgggtactagaaga
taccagcaacggatgttaaaagaccagcgtgcaagtgggggttgggtagaaacagccagc
actagcagttctgtgccagtttgtgccatctgcctggaagagttcacagatgggcaggag
ttgcgcattttgccctgctgccatgagtaccatttgggttgtgttgatccatggctgaga
cagaatcacacctgccccctctgcatgtatgatatactagacagtgggaccccaccccga
cctctggctcacagagcaccttcacagacgcagctatggggccgatacccaggttctgct
cgtctcatgtctcacctgccgccccatggaacaccgatggtcttccctaccccaaacaac
agtctattcctgccaagagctccatattatctggaccatacacatcactggcaaatgcca
gagcaaatggctatgcaaatgcgcactcatcggcgaggagcagaaggtacacgagagttg
ggcatctctccaggctgccaagactccagtggctacttgcctgatgacccaggcagtgat
agtagttcaggaccatgccatggctcttccagtgagaactgcacagatataagcctgcac
tgtttgcatggtacctcttcttcctctgtacacagctctcagagcaaccaggaagattct
tccccaccagcacttgcctcttatctgctacctcagggtgaactcccagcactgaacccc
cttctgtctacacaggcttcttatgctagccatgttcattttcatcagcaccgtcatcac
cactataggcgaaaccagcctagtatgtctcactctcatccccacaggtccaaaaggagg
accaaggtttctagggcagatcccagttattacagggagcacagacatacaactggagct
aatggcgagttaagatcacttatggttcgcagagagcccagaccttcatgttcaagaact
tgttttgaccccaggactaatagggagcacccaaggcaccaacagtccatgccacaggct
gcttcagtagtgcagggctcaagtgaacctgatgtagccacctcccttaggggctcaaga
accgacccaccaagtaggacttatagaaagaaaaaatcctctgccccttcgcacctccca
ttgttgtacagtccccgacactgccacccagctaacagtgttcagatgtctgaaagcagc
cacccgagatgggcagaagaggttcgacttctacattccagggtgaactcgcatcgagaa
aatacagcaatgatgcacctatatcatccacctcatcacaaccaaggtgccacggaggag
atagaagctgtgtgtgagcatgcagtgtaa
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