Xenopus tropicalis (tropical clawed frog): 100491422
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Entry
100491422 CDS
T01011
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100491422 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491422 (pex6)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100491422 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
nSTAND3
Vps4_C
AAA_25
AAA_28
AAA_5
Mg_chelatase
AAA_33
TsaE
DUF815
TIP49
RNA_helicase
AAA_7
NPHP3_N
Parvo_NS1
AAA_22
IstB_IS21
AAA_18
AAA_2
AAA_14
AAA_24
ATPase
AAA_11
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
100491422
NCBI-ProteinID:
XP_031758131
Xenbase:
XB-GENE-6049481
UniProt:
A0A8J1JNE8
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Position
5:complement(286080..312467)
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AA seq
896 aa
AA seq
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MMGEEALGETNGQQRMMGEEALGERPWALTAPVLSSFAREVAPRRLRVAPIDAEAMVRAG
RLQELGGPVDRGAAVWVTKSQLRDLGFFHREWVWVWAVPGGEGQGGHLAIILATEFCWGQ
PDKYRHLLSNLSAPPGTYPHSTLPPGTYPHSTLPPGTYPHSTLPPGTYPHSTLPYGFPTG
THTALISAPLLFNLAPRTRPLSEILIQRFCSDTLEGGSSALVGPPLAKQLCVQIVASPSY
DSDAPYRQALFHHFLTARVIQRGDILCLSSLSHGEFLQNNPRRAGRCPDLYFKVLGIDGR
PGEEQRPAYLAHSNHMILFQEGSTLSYVPSFPSRDGHVFWSSLFPAGLSHAVDEICRILQ
PYLEVSREVLPTGGRVLFSGSPSSGKKTVVKAACSRLNLHLYQIECARLCREGSAGNVAR
LKASLSRVPEFAPCLVLLSQVELLGRERDGSREDGRVISAFRSLLLGGETQARDLPVLVV
ATTSSPKEIPLDIQTCFLNEVSLEPPTEEQRLSLLAALTAPLPLGRDVSITKLARTTAGF
VLGDFCSLVSRAGLSASNRIRSSRPVTEEEGEGPLAAGVALGAQDFQEALSALQDSQAEA
VGAPKVPCVQWRDVGGLHDVKRQLLDTVQLPLEHPEVLSMGLRRSGVLLYGPPGTGKTLL
AKAVATECAMTFLSVKGPELINMYVGQSEENVRKVFSRARSAAPCIIFFDELDSLAPSRG
RSGDSGGVMDRVVSQLLAELDGLNSSSDVFVIGATNRPDLLDSALLRPGRFDKLLYVGVN
EERDSQLRVLAAITRKFSLDPSVDLSAVIERCPRAVTGADLYSLCADAMMGAVKERVQQL
EDGHQQQTPEPLVKMEHFLQAANRLQPSVCVSELQRYERIRKQYSAPDSPAVSLAR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaggaggcgctgggggagacgaatgggcagcagaggatgatgggagaggag
gcgctgggggagagaccctgggccctcacggctcccgtactgtccagctttgcccgggaa
gttgcgccccgcaggctccgtgtggcccctatagatgccgaggccatggtgcgggcaggg
aggctgcaggagttggggggcccggtggatcggggggcggctgtgtgggtcactaagagc
caactgcgggacttgggcttcttccaccgggagtgggtgtgggtatgggcggtgccgggg
ggggaggggcagggggggcacctcgccatcatattggctactgagttctgctgggggcaa
cctgacaagtaccggcaccttctcagcaacttgtctgccccccctggcacctacccccat
agtaccctcccccctggcacctacccccatagtaccctcccccctggcacctacccccat
agtaccctcccccctggcacctacccccatagtaccctcccctatggcttccccactggc
acccacactgccctcatctctgcccccctcctctttaacctggcgccccggactcggcct
ctcagtgagattctcatacagaggttctgttctgacacattggagggaggcagttctgct
ctcgttggaccccccttggccaagcagctctgtgtgcagattgtggcgtctccatcgtac
gacagtgatgccccctacaggcaggctttgttccaccacttcctaactgccagggtcatt
cagcgcggggatattctgtgcctctcatcgctctcacatggggagtttttacagaacaat
ccgagacgggccggcaggtgccccgacctttattttaaggtgcttgggattgatgggcgg
ccaggagaagagcagcgccccgcctacctcgcccattccaaccacatgatcctgttccag
gaaggcagcactctcagttatgttccgtcctttccttcccgggatggacatgtgttctgg
agcagtctcttcccagcaggactctctcatgcagtggatgaaatctgtcgcatccttcag
ccttaccttgaggtctcgagggaggttctccctacaggagggcgggtcctgttctctggt
tctccttccagtggcaaaaagacagttgtgaaagccgcgtgcagtcgcctaaacctccat
ctgtaccagattgagtgtgccaggctgtgcagggagggcagcgcgggcaatgtggcacgc
ctcaaggcttccctctctagggtaccggagtttgccccttgcctggtcctactgagtcaa
gtggagcttctgggccgagagcgagacggcagcagggaggatggaagggttatcagtgcc
ttccgtagccttctcctgggaggggagacccaggccagggatctccctgtgctggttgtt
gccaccacctcttcccccaaggagataccactggacatacagacctgtttcctgaatgag
gtttccctagagcccccgacagaggaacaacggctcagcctcctggcggctctcactgcc
cctctgcccctgggccgggacgtcagtatcacaaagctggcacgcacgactgcgggtttt
gtattgggcgacttctgctccctcgtgtcccgggccggactctctgcctccaacaggatc
cgcagctccaggcccgttacagaggaggagggggaagggcccttggcagcgggggttgcg
ctcggggctcaggatttccaggaggccctttctgctctgcaggactcccaggccgaggct
gttggggcgcccaaggtgccttgtgttcaatggagggatgtcgggggtctccatgatgtg
aagcgtcagctcctggacactgtgcagcttcctttggagcaccccgaagtgctgtctatg
ggtctgcggagatcaggggtccttctttatggccccccaggaaccggcaaaacacttctg
gcaaaggctgtggctactgagtgcgccatgacgttcctaagcgttaaagggccggagctc
atcaatatgtacgtgggtcagagcgaggaaaacgttcggaaagtgttctcccgtgcccgc
tcggcggccccctgcattatattctttgatgagttggattcgttggcccccagtcggggc
aggagtggggactcggggggagtgatggacagggtggtgtcgcagctgttggccgagttg
gacggactgaactcatccagcgacgtctttgtaattggagcgaccaatcggcccgatctg
ttggattctgctctgctgagacccggaagatttgacaaattgctgtacgttggggtgaat
gaagagcgagattcccagctcagagtcctggcggccattacacgcaagttctcccttgac
ccatcggtggacctgtctgcggtgatagagcgctgcccgcgcgcggttaccggggccgac
ttgtactctctctgcgccgacgccatgatgggcgccgttaaggagagggtgcagcaactg
gaggatggacaccagcaacagaccccagagccgttggtcaagatggagcattttcttcag
gcagccaatcggctgcagccgtcggtgtgtgtcagtgagttacagcgatatgaacgtatc
cgcaagcagtactctgctcctgactcccccgccgtgtccctcgcccgctga
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