Xenopus tropicalis (tropical clawed frog): 100491445
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Entry
100491445 CDS
T01011
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100491445 (gle1)
03015 mRNA surveillance pathway
100491445 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100491445 (gle1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100491445 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
TMEM174
SAC9_GBDL_1st
Motif
Other DBs
NCBI-GeneID:
100491445
NCBI-ProteinID:
XP_002935547
Xenbase:
XB-GENE-972613
UniProt:
A0A8J0QL07
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Position
8:complement(22698680..22709583)
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AA seq
687 aa
AA seq
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MPRRDWKTLEALQESPKGKLRYDTEWSLDEEELLERSMASCMLSPHSAWVLDNMVSPVQR
HTSNTNSLSTQETRGSYSVKAVSPDFETDFSDFVIKKTPESHQDSMKAETSPKLLSEISA
EVEGSIYLYREAERIKMQNKIQKRLEMFVQYEKNFADQATEQLKRFEEMMELKQRQERDR
LQEQLEEGSKEALGQQEKLKEEHRTRAKLLNRKLREAEQQRHLEQERIRQEEGRDRERRL
CFLQQEVLQLVQQIEVDYKHQETLRMDLSAYSQRGNQICGILSSVVRSSEQSGFPTQEDV
NVGERSLQEMQALVSSMQKEVSAAEERRKAEEVAERVKQKELEKQQTKAQAPAPAQTHQK
SQKEGLQEKASPCIMKSYQQLQNMCEQSLNDFAPLQDARDPKVKAIRGDLQKAIYIPVSQ
ISSKAGSNLKEIFEKLNNLLLGKRVSSFGSSMISVSQHPQALDFVYYKLAEKLVKQGEEE
IASHHEAAFPIAAVASGIWEHHPKVGELFLAHLYKKCPYALPFYPAFKEGTSIEEYQRIL
GYKVEDSQVEQQDNFLKRMSGMIRLYAAVMQIRWYYSNKQESHPHGLNYAWQWLGQLLNM
EPVADITSTLLYDFLEVCGNALMQTYHFQFWKLLLLIKNEYLPRIEIISTSAQMGSVTRL
RLFLENSIKKNEIPLPKGYLSQSFWRS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacgggattggaagacccttgaggcgctgcaggagtctcccaaggggaagctg
agatatgacacggagtggagcctggatgaagaggaattgcttgaacgcagtatggcatcg
tgcatgttgtctccgcactcagcttgggtgctggataatatggtttcaccagtgcagcgc
catacttctaacaccaacagcctgtccactcaggaaaccaggggctcctactccgtgaag
gctgtttcacctgactttgaaactgatttttcagattttgttataaagaagaccccagag
agccatcaagactcaatgaaggcagagacgtctcccaagttgttgtctgaaatatcagcc
gaagtggaaggctccatttatttgtatagggaggctgagaggataaaaatgcagaataaa
attcaaaagcgcctggagatgtttgtgcagtatgagaagaactttgcagaccaggctacg
gagcagcttaagcgctttgaggagatgatggagttgaagcagagacaagagagggataga
ttacaggagcagttggaggaaggttcaaaagaagccttaggacagcaggagaagctaaag
gaagaacaccggacaagggccaagctcttgaacaggaagttgcgggaagcagagcagcag
aggcatctggaacaggaacgcatccgccaggaggagggccgtgatcgtgagcgcaggctt
tgctttttgcagcaggaggttctccagctggtccaacaaattgaagtggactacaaacac
caggagacactccgtatggacctctctgcctacagccagcgcgggaaccaaatatgtgga
attctgtccagcgttgtgcgttccagtgagcagagtgggtttcccacccaggaagatgtg
aatgttggggagcgttctctgcaggagatgcaggcactggtcagctccatgcaaaaggaa
gtcagcgctgctgaggagagaaggaaagcagaagaagtggctgagagagtgaaacagaaa
gaattagagaaacagcagacaaaggcacaagcacctgcacctgctcagacccaccaaaaa
agccaaaaagaaggactgcaggaaaaagcctctccgtgtataatgaagagctatcagcag
ctacagaatatgtgtgagcaaagcctgaacgactttgccccacttcaggatgccagagac
ccaaaggttaaggccatcagaggagatctccagaaagccatatatattccagtcagccag
atctcgtcaaaagcaggatctaatctgaaggagatttttgaaaaattaaataacttgctc
cttggcaaacgggtctcctcctttggctcctcgatgatctctgtgtcgcagcacccgcaa
gccttggactttgtatactacaagctagctgagaagcttgtgaaacaaggtgaggaggaa
atagcttcccatcacgaagcagcatttccaatagcagcggtggcttctggtatctgggag
caccacccgaaggtgggggagctgtttctggctcatctgtacaagaagtgtccatatgct
ttgcctttctaccctgcttttaaggaaggaacctccatagaagaatatcagaggattcta
ggttacaaagtggaggattctcaggttgaacaacaagataacttccttaaaagaatgtca
ggaatgattcgcctctatgctgctgtcatgcagatacggtggtactacagcaacaagcaa
gagtctcatcctcatgggctgaattatgcatggcaatggctggggcagctccttaacatg
gagcccgtagctgacatcacttcgactcttctctatgattttttggaggtgtgtgggaac
gcattgatgcagacgtaccatttccagttttggaagctactgctgctgattaaaaatgaa
tatttacccaggattgaaattataagcacgtcggcacaaatggggtctgtcactcgactt
agactttttcttgagaactccataaagaagaatgaaatccccttacccaagggataccta
agtcagtccttctggagatcctga
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