Xenopus tropicalis (tropical clawed frog): 100491494
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Entry
100491494 CDS
T01011
Symbol
bdp1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100491494 (bdp1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100491494 (bdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
FAM25
Motif
Other DBs
NCBI-GeneID:
100491494
NCBI-ProteinID:
XP_002934881
Xenbase:
XB-GENE-6464887
UniProt:
A0A8J0QPA5
LinkDB
All DBs
Position
1:182615356..182664935
Genome browser
AA seq
2379 aa
AA seq
DB search
MIRRARLSFKPNVKPGGRGPGPSPGTTPGSGGIATDPNRASQEPPCPNHETVEKDNGVAV
SDVAETEGATTVSAAADRGDSFVQEEEEKGTGLCKHAVPTGAEVQACATSTPLQRRKRFA
TLPNIGKPRVSIPSAVTTLPLKASQGDIPIAVPSIGVAEAATPEKAKLESSFKIPTPPNI
SQASLPEKRTPVPQVPQFTPFKKPVLKQPEVSPVKAVEPLPKDDLFPLKERPSQGSCISG
EFLKKTKSSPLKKVAGNLEKERLKRARKLRDLLRDELRKERRASKEKFTSVDYSDEIDRS
KMTMRDFVHYIPENNPMTSSISDKNTSDKPATVESPSAGSEMKSAPREDEDDLDEEEDEG
PLLVPRVKVAEDGSIILDEESLTVEVSRTKGPIVENGDPIFERGSTTTYTSFRKSKYSKP
WSEKETDMFFLAISMVGTDFSMITHLFPHRQRIEIKNKFKREERLNGWRIDKAFREKKAF
DQQLFAELLERALIQEVKKPKAPKTPKAKGEKGNKPRKPRKKQKDKASAEQDSNLGDPEV
EAVDSGTAEKENEESQTVIGDEPTPLPGKKKRARKKKNEAQSVEPEDLSECQNKPSTLPA
KEGKSRKKILIPLIGKGEALDISADPETVDPTEMETAEGEESVDAEKIQEKKKKRRQKKK
PIIVESDSECQSGSDVLHIAEEEDSGSKEFNATLDSSVESCDQSVQEATEGSTNAVAEEI
LSGDDGDDGTLEPYEDDDDDGDELLSMQEDTLVSNEQDSVVLLASDISLFDNSSISIADT
QVETSPVESLQEATDHKMTVSTTEKPQECDIQEDSGARTREPSASEDEFIQSCTKSSPVG
KGRIQKPKPNLPKLSNRRGGQENRGDIPEGRIEVATEDNTTTFQNSEDDKSTNIPMSTPN
NEDSVEKEESAIKSQVSSTSLLGSTQTPIKPTPVVRFQRPKPNLTASSRKLEDRGDIQEE
GSKMSTEEPAEGDRGPVVGMPGPKNISMNIPLISQEEDSPEDQENSCDKKEESVSQVECT
SSPVISLPSARGRLQRPKPNLLSISRKGKKEVKADIQSSEAANEDTVKTIDYMKEESCAI
GKPQEHVLDTLLTEESSTAGIASAVSCPDTFKTTLTMNAEADGHKRDVGSDEPEKNSEPM
QKSTSEEQQAPSPVKATPLSRSRFQKPKPNLMKTSVRKGKEGNKVSADNLAEIPQDKKED
TSLSEMLELQLKEPEISSVDEEKVPNCRQSSAGSMLPSTVAPDSITETLEAKGTSNNSQQ
TRKQEPLRPAVLPRGRFQKPKPNVGRAAAAKKEVLSSQELSSDGTSTAASDQSMEHMEYH
LPTVSENKEQSHLISRDKGKEGSLSPNEPESSSNATVQEDKEKDNATAISIQELEHTKGG
PAQESLKPAVPLKGRYQRPKPNLSRAAAHKDSSACLKNTSCETVEQQQQSASSAPKVEIM
VMPGLPEKLSGLAENSEAPQVCSKNGQNNSTTDLKQDDILQQQSVNKDSQSNSAVQPSPI
RGRFQRPKPNLLRAIAKKATSKPSDDEKAKEAGDSKTDLISETKGSDAESSQQLSVEEHQ
PTSGSPLHSSGHGSGEKDISPAAGTTLAEEPGSLNKEDNSSPAIKPAPLRRGRILRLKPN
LVNVPCRRESQGWDQTKAASDDATDSGGAAECVPLPESHITDALGKAPANKRKATDKSSV
KLLAKKIRSSDIAETQSSLSESESDRGSLDIEGQESTAATRTRFGRKVKNSIPEKPQVQP
KGTDNVSDLEKGRNAQNAKSNGSKIKAARPVSRKGTALVKLRASRWEEQDDDDEELDFKD
ESFNLSPDKVNQAPVFVPFSLRSLKHGPAEIEETVEELIIPVDILDSHTIPETQNNNPIS
EESENSSSLKSDELSSDVTDSESVTADKGTKDCSDGSTEAAMTLISMGNPVFQSRVHEES
SNLKEDLSSSSETQSDLQHLDPVNSLSLPSELGPIHTGLPSGEIVEAHEATAEVIDTHVH
TFEEGNGDPAKMQPRAESLDGSVGATESGIILLECLPSNSSDLRLSGESDAPSDATCEVQ
LEQSEKHSEEVQHSIVPDGDNLSGENECPAEEATFILTLVEIPINSEYPYSCDSLSSEEP
LPAPVLISSGSAQPVTLTQSSSSESAEVSVRLPSEQCSTSGEESNCSWSSSSAPRKRTAS
RQDDGSPSVKRALLMCDKPEESSEDSGTEARNSPESSTTNTQEITSPEAVCDNVTEPSQD
SELSGDALSGVETLPEGSPDSRSLDDSLPAIAAGDATSKQQGVMDALHFSCINTLPSTST
TPIKRPGWKPMGFLSLVCKNKNNKANNPSNRKKRVLKPNVCKKPPSTAVQSQDVTVSEVS
DSQAATSKTLGANEVASEEEGTTVSQYFFSDIFMPVDDE
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaagagcgcggttaagtttcaaacccaatgttaagccgggcggccgcggccct
ggccctagccccggtacaacacccggcagtggtggcattgctaccgatcccaacagggcc
tctcaggaacccccatgcccgaaccatgaaaccgtcgagaaggataacggagtggcggtg
tctgatgtggctgagacagagggagcgacaacggtatcggctgctgctgacagaggggac
tcgtttgtccaggaagaggaggagaagggaacaggcctgtgcaaacatgctgtcccaact
ggtgctgaagttcaggcatgtgcaacatctacacctctccagcgtagaaagagatttgct
actttgcctaatattggaaaaccaagggtctccattccttcggccgttaccacattacca
cttaaagcttctcaaggagacattcctatagccgtacctagtatcggtgtggctgaagcc
gctactccagagaaagccaagttagagagctctttcaaaatacccactccccctaatatt
tcccaagcttcgttgcctgaaaagagaactccagtgccccaggttccacagtttacgcct
tttaagaaacctgttcttaaacaacctgaagtaagtcccgtgaaagctgttgaacctctg
ccaaaggatgatctgtttccactaaaagagagaccgtcccaggggtcctgtatcagtggg
gaattcctcaagaaaacgaaatcttcccctctaaagaaggtagccggcaatttggagaaa
gaaaggcttaaaagagctcggaaattaagggatttgcttcgcgatgaactaagaaaagag
agaagagcatcgaaagagaagtttaccagtgtagactacagcgatgaaatagatcgctcc
aaaatgaccatgagagacttcgttcactacatcccagaaaacaaccccatgacgtcttca
atttctgacaaaaacacaagtgacaagcctgccactgttgaatctccgagtgcaggatca
gaaatgaaatctgctcccagagaagatgaggatgatttagatgaagaggaagacgaaggt
ccattattggtcccacgtgtgaaagtggcagaggatggctccattattcttgatgaagag
agtttaacagtagaagtatccagaactaaaggtccaattgttgagaatggcgatccaatc
tttgagcgaggctccaccacaacctatacaagttttcggaagtccaagtactctaaacca
tggtcagaaaaagaaacagacatgttctttttggctatcagcatggttggaacagacttc
tcaatgataacgcaccttttcccacacaggcagcgaatagagatcaagaacaaattcaaa
cgcgaagaacggttaaatggatggaggatagataaggctttccgagaaaagaaggcattt
gaccaacagttgtttgcagagcttcttgaaagagcattaatacaggaggtaaaaaaaccc
aaagcaccaaaaacgcccaaggctaaaggcgaaaagggaaataagccccgaaagccacgt
aaaaagcaaaaagataaagccagtgcagaacaagacagtaacctgggagatccggaagtg
gaggctgtagattcaggcactgctgagaaggaaaatgaagagtcccagactgttatagga
gatgagccaacccccctccctgggaagaaaaagagagcacgaaagaaaaagaatgaagca
cagtctgtagaaccggaagatctttctgagtgtcaaaataaaccttcaacattgcctgca
aaggaaggcaaatccaggaaaaaaatacttattcctttaataggaaaaggagaggccctg
gatatttctgctgatcctgaaactgttgatcccacggaaatggaaacagcagagggcgaa
gagagtgttgatgcagaaaaaatccaagagaaaaagaaaaagcgtcgacagaaaaagaaa
ccaatcattgtggagtcagattctgaatgtcaatcaggcagtgatgtgttacatatagct
gaggaagaggattctgggagtaaagagtttaatgctacgctggacagctcagtggagagt
tgtgaccaatctgtgcaagaagctacggaaggcagcaccaatgcagtggctgaggaaatc
ctttcgggggatgatggtgacgatggaactctggaaccttatgaagatgatgatgatgat
ggtgatgagttgttaagcatgcaggaggatacattggtttccaatgagcaggattcagtt
gtgctgctggcctctgatatatcgctgtttgacaatagttccatatctatagctgatact
caggttgagacaagccctgtggaatctcttcaggaagccactgaccataagatgaccgta
agcactactgagaagcctcaggaatgtgatattcaggaagattctggagccaggactcgg
gagccctctgcctcagaggatgaattcattcaatcttgcactaaatcctcacctgtggga
aaaggcaggattcaaaaaccaaagcccaacttgccaaaattatccaatagaagaggggga
caagagaacaggggggatatacccgagggtagaattgaagtggctactgaagataacacc
acaacatttcagaactcagaagatgacaagtcgacaaatattcccatgagcactcctaat
aatgaagattctgtggagaaagaggaatcagcaataaaaagccaagtatcttctacgtcc
ctgcttggatccacgcagactcccattaaaccaacacctgtagttaggttccagaggcca
aagcctaacttgacagctagtagcagaaaactggaggacagaggtgacatccaggaagaa
ggaagtaaaatgtctactgaggaaccggctgagggtgaccgtggaccagtggttggcatg
ccaggtcccaaaaatatttccatgaacattccccttatttctcaagaagaagattctcca
gaggatcaagaaaattcatgtgataaaaaggaggagtctgtttctcaggtggagtgcaca
tcttcccctgtgatatccttaccctcagcaagaggaagactgcaaagaccaaaaccaaat
ctactgagcatatcaagaaaaggaaaaaaagaagtgaaagcagatatccagtcttctgag
gcagccaatgaggatactgttaagaccatagattatatgaaagaagagtcttgtgccatt
ggaaaacctcaagagcatgtgctggacacgctcttaacagaggaaagcagtacagccggg
atagcttctgcagtttcctgccctgatacattcaaaactacactgacaatgaatgcagag
gcagatggtcataaaagagatgtgggatcagatgagcctgagaagaactctgaaccaatg
caaaagagcacctctgaggagcaacaagcaccgtccccagttaaggcaacacctctgtca
agaagcagatttcaaaagccaaagcctaatttaatgaagacgtctgttaggaaaggaaag
gaagggaataaggtgtctgctgacaaccttgctgagattccacaggacaaaaaagaagac
acatctttatcagaaatgcttgaactccagcttaaggagccggagatatcttctgtagat
gaagaaaaagttcctaattgcaggcagtcgtctgcaggctccatgcttccctcaactgtg
gcacctgattcaattacagaaaccttagaagcgaaaggcacaagcaataattctcagcaa
accagaaaacaagagccactgagacctgcagtgttaccaaggggtagatttcaaaagcca
aaaccaaatgtagggcgagcagcagcagccaagaaagaagtgctctcttcccaggagtta
agctctgatggaaccagcacagctgctagtgaccagagcatggaacatatggagtaccat
ttacccactgtttcagagaataaggaacaaagccatttaatatccagagacaaagggaag
gaaggatcactctccccgaatgagccagaatcttcctcaaatgccactgttcaagaggat
aaagagaaggataatgctacagccatatctatccaagaactcgaacacactaaaggggga
ccagcacaggaatccctgaaaccagctgtaccattaaagggtagatatcagagacccaaa
ccaaatctcagcagagcagctgcacataaggattcctctgcttgcttaaagaacaccagt
tgtgagacagttgaacaacaacaacaaagtgcttcttctgccccaaaggtagaaattatg
gttatgccagggctgccagaaaagctgagtgggttggctgagaactctgaggcacctcaa
gtgtgtagcaaaaatgggcaaaacaattccacaacagaccttaaacaagatgatattctc
caacagcagtctgtgaataaagacagccaatcaaattctgcagttcaaccctcacctata
aggggtcgttttcagcgtccaaaaccaaacctgttgcgagctatagccaagaaggccacg
tccaaaccttcagatgatgaaaaggcaaaagaggcaggtgactcaaaaactgatttgatc
agtgaaaccaaaggcagcgacgctgaatccagtcagcagctttctgttgaggaacatcaa
cctacaagtggatctccccttcactcatcagggcatggatcaggagaaaaggacatctct
ccagctgctggcactacattagctgaggagcctggaagtcttaacaaagaagacaactca
agtccagcaattaaacctgcgccactaaggaggggaaggatattgcggcttaaaccaaac
ttggtaaatgtgccctgcaggagagagagccaagggtgggaccagactaaggctgctagt
gacgatgccacagattccggtggagcagctgagtgtgtgcctttgcctgaaagccatatc
actgatgccttaggaaaagcaccagccaacaaaaggaaggcaactgataaaagcagtgtt
aaattattggccaagaaaatacgctcctctgatatagctgagacacaaagcagtttgtcg
gagagtgaaagcgaccgtgggtcgttggatattgagggacaagagagtactgcagctact
cgaaccagatttggacgaaaggtgaagaattctataccagaaaaacctcaagtacagccc
aaaggaacagataatgtgtctgatttggaaaagggcaggaatgcacaaaacgcaaagtct
aatggcagcaaaatcaaagcggcgaggccagtatccaggaagggaactgccctggtgaag
ctcagggcttctcgatgggaagaacaagatgatgatgatgaagaattagacttcaaagat
gaaagttttaatctttcccctgataaagtgaaccaagcaccagtatttgttcctttcagc
ttacgttcccttaagcatggcccagctgaaatcgaggagactgtagaagagctcataatc
ccagttgatattttggattcacacacaatccctgaaacacagaataataatccaatatct
gaagaaagtgaaaattcttcttctctaaagtctgatgaactgtcatctgatgtaacggac
tctgaatcagttactgctgacaaaggtacgaaagattgtagtgatggaagcacagaagct
gcaatgacattaatttctatgggaaatcctgtcttccagtccagagttcatgaagagtct
tcaaatctgaaggaggatctttcttccagtagtgaaacccaaagtgaccttcagcactta
gatcctgtgaactcactttcccttccttctgagctgggcccaatacatacaggccttcca
tcaggtgaaattgtggaagcacatgaagctacggcagaagttattgatacccatgtacac
acatttgaagagggaaatggtgatccggccaaaatgcagccacgagctgagagccttgat
gggtctgtgggtgcaacagagtctggcatcattttgctagaatgtttgccttctaattca
tctgatttaaggctttcaggagaaagtgacgccccgtctgatgccacatgtgaagttcag
cttgagcagagtgaaaaacacagtgaagaagtgcagcacagtattgttcctgacggtgac
aacttgtcaggtgaaaatgaatgtcctgccgaagaagcaacatttattttgacacttgtt
gagattccaataaactcagaatatccgtactcctgtgattcattgagctctgaggaacct
cttccagctcctgtgctgatcagctcaggctctgctcaacctgtaactctgacacaaagc
agcagctctgagtctgctgaggtttctgttcggttgccatctgagcagtgttctacttct
ggtgaagaaagcaattgctcttggtcatcctcttcagcccccaggaaaagaacggctagc
aggcaggatgatggctctccttcagtcaagagagccttgctgatgtgcgataagccagaa
gaatcatctgaagacagtggaactgaagcacggaattctcctgagagcagcactaccaat
acccaagaaataacctccccagaagcagtgtgtgacaatgttacagagccctcacaggac
tcggagctgagtggagatgccctcagtggggtggaaacattgccagaggggagccctgat
agccgctcactcgatgattcactgccagccattgcagctggagacgccacaagtaaacaa
caaggagttatggatgcattgcatttctcctgtataaacacactgccttcaacttccaca
actcctataaaaaggcctggatggaaaccaatgggatttttatcactggtttgcaaaaac
aagaacaacaaggcaaataacccaagtaacaggaaaaaacgtgtgcttaaacccaatgtg
tgcaaaaagcctccttcgacagcagttcagtcccaagatgtgactgtttctgaagtatct
gacagtcaggcggccacctccaagacactcggtgcaaatgaagtggcttctgaagaagag
gggacgactgtttcacagtatttttttagtgatattttcatgccagtggatgatgaatga
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integrated database retrieval system
