Xenopus tropicalis (tropical clawed frog): 100491498
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Entry
100491498 CDS
T01011
Symbol
rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100491498 (rere)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100491498 (rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
DUF7952
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100491498
NCBI-ProteinID:
XP_002936427
Xenbase:
XB-GENE-919902
UniProt:
A0A8J1JU86
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All DBs
Position
7:complement(89377272..89587372)
Genome browser
AA seq
1540 aa
AA seq
DB search
MTADKEKDKDKDRDRDREREKRDKTRDGENSRPRRSCTLEGGAKNYAESDHSEDDDNENN
STTAEEAAKKNKKKLPKKKSRYERATNGEITSFVTEDDVVYKPGDCVYIESRRSNTPYFI
CSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIRNRE
LFISDYVDTYHAAYLRGKCHISHFSDIFAAREFKARIDSFFYILGYNPETRRLNSTQGEI
RVGPSHQAKLPDLQPFPSPDRDAITQHEELVWMPGSNDCDLLMYLRAARSMAAFAGMCDG
GSTEDGCAAASRDDTTLNALNTLHESNYDAGKALQRLVKKPVPKLIEKCWTDDEVKRFIK
GLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRT
ATTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFSTTSKDWHHGGRENI
LLCTDCRLHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLNGKHSMRTRRNRGSMSTLRS
GRKKQTTSPDGRVSPINEDIRSSGRNSPSAASTSSNDSKAESLKKPSKKIKEEASSPLKS
AKRPREKPVSDAEETDRASAKKSKTQEISGPNSPSEGEGEGEGEGEGEGEGESSDSRSVN
DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQVSQPQNGAPAMVPPAVSPGPLP
PSIPPSHSIAPVQISPSSSLPPSQPPQPPSLSLVQAPVLHPQRLPSPHPAIQPLAGSQGE
PQPPTPTQIHPQSPHHGPLPSMPHNMQAQPVLQYPGSSSPQPCASQVSPVPQTTSHPFPH
TSQGQQTAQPPLQIPSQTPREQPLPPAPMAMPHIKPPPTTPIPQNPSQSHKHPPHLQGPS
PFSMNSNLPPPPALKPLSSLPTHHPPSAHPPPLQLMPQSQQLQSSAAQPPVLTQSQSLPQ
TSGHPQSGLHSIPPQPAFPQHTFIPGGPPSITPPSCAPTSTTSILPAASPGLQPPTPVSN
ATASSGVCIPVSPSPNPPPLPPIQIKEEAPDEIEEPESPPLPPRSPSPEPTVIDAPSHAS
QSARFYKHWDRGYNSCARSDLYFIPLGGSKLAKKREEAAEKAKREAEQKVREEREREKEK
EKEKEREREREREAERAAKACSSHESRLGESQLSAATHIRPSFEPPPTTIAAVPPYIGPD
TPALRTLSEYARPHVMSPTNRNHPFFVPLNPNDPLLAYHMPGLYNIDPTMRERELREREL
REREIRERELRERMKPGFEMKPPELDQLHPAANPMEHFARHGALIPQTAGPHPFASFHPG
LNPLERERLALAGPQLRPEMSYPERLAAERIHAERMASLSNDPLARLQMFNVTPHHHQHS
HIHSHLHLHQQDPLHQDCCCNSKSWPGVAENGTCVPVHFPGSAGPVHPLVDPLAAGPHLA
RFPYPPGTIPNALLGQPPHEHEMLRHPVFGTPYPRELPAGIPPPMSAAHQLQAMHAQSAE
LQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgacaaagaaaaggataaagacaaggaccgggatcgggacagagagagagaa
aaacgggacaaaacccgtgatggggaaaactcaaggccgcgacgcagttgcacactagaa
gggggtgccaaaaactatgcagaaagtgaccatagtgaagatgatgacaatgaaaacaat
agcacaacagcagaggaggctgccaagaaaaacaagaaaaagctgccaaagaagaaatcg
cgatatgaaagggccactaatggggagatcacgtcatttgtcacagaagatgatgtggtc
tacaaacctggagactgtgtttatattgaaagcagaagatcgaacactccttattttata
tgtagcattcaagacttcaaattgagcaagagagaccatctcctgatgaatgtgaagtgg
tactatcgccagtcagaggtgccagactctgtctatcagcacttggtacaagaccggcat
aatgaaaatgattctggtcgagagctggtaatcacagatccagttatccggaatagagag
ctgtttatctcagattatgttgatacataccatgcagcttacctcagggggaagtgccac
atctcccacttctcggatatattcgctgctcgggagtttaaagccaggatagattcattc
ttctacattctgggctacaatccagagacaaggaggcttaacagcacccagggtgaaata
agagttggacccagccatcaggccaagctccctgatttgcagccttttccatcaccagat
cgtgatgccattactcagcatgaagagttggtgtggatgccgggtagtaacgactgtgac
ctgctgatgtacctgcgtgcagccaggagtatggctgcctttgcagggatgtgtgatggt
ggatccacagaagatggttgtgctgctgcttctcgagatgacactacacttaatgctctt
aacacactacatgaaagcaactatgatgctgggaaggccttgcagcgcctggtgaaaaag
cctgttcccaaactgatagaaaaatgctggactgatgatgaagtgaaaaggttcataaag
ggcttgagacaatatggcaagaatttcttcagaatcaggaaagaactgcttccaaacaaa
gaaacaggtgagctgatcactttttactactactggaagaaaactcctgaagctgccagc
tcccgtgcacaccgcagacaccgccggcaggcagtcttccgcagaataaaaacacgcact
gctaccactcctgtgaacactccctcacgaccaccatccagtgaattcttggatctgagc
tctgccagtgaggatgactttgacagcgaggacagtgaacaggaactaaaaggctatgca
tgccgacattgcttctctaccacttccaaggactggcaccatggtggacgggagaacatt
cttctctgtacagactgcagacttcactttaagaaatacggtgaattaccacctattgaa
aagcctgtggatccaccaccatttatgttcaaaccagtcaaggaggaagaggatggactt
aatgggaaacacagtatgaggaccaggcggaacagaggctcgatgtcaacgctacgtagt
gggcgtaagaagcaaactaccagcccagatggcagagtatcacctataaatgaagatata
cggtccagtggtagaaattctccaagtgctgccagtacatccagtaatgatagcaaagca
gaatctttgaagaaaccttctaagaagattaaagaggaggcttcatccccactaaagagt
gccaaacgtccaagagagaagccagtgtctgatgctgaagagactgacagggccagtgca
aagaaatctaaaacacaagaaataagtgggccaaactctccatcagaaggggaaggtgaa
ggtgaaggagaaggcgagggtgaaggagaaggggagagctcagatagccgaagtgttaat
gatgaaggaagcagcgatccaaaggacattgatcaggataaccgcagcacatcccccagt
attcccagtcctcaggataacgagagtgactcagattcttcagctcagcagcaagtgtca
cagccccaaaatggagctccagcaatggtgccacctgctgtgtctccaggacctctacca
ccttctatacctccttctcatagtattgctccagtacagatatcaccgtcttcttcactg
cctccttcacaaccacctcagcctccatcactttcacttgttcaagctccagttctgcac
cctcaaaggcttccctcaccacatccagccatccagcctcttgctgggtcacaaggagag
ccacaacctcctactcctacccaaatccacccacagtctccgcaccatgggccattaccc
tcaatgccacacaatatgcaggcacaacctgttctacaatatccaggttcttcttcacct
caaccatgtgcctctcaggtctctccagtgccacaaacaacctcccatcctttccctcat
acttctcagggacaacaaactgctcagcctcctctgcagatcccctctcaaaccccacgt
gagcagcctttgcctcctgcgcctatggccatgcctcatataaagccccctcctaccaca
cctattcctcagaatccttcacagtcccacaaacatcctcctcatttacagggaccctca
cccttttccatgaattccaatttgccacctcctcctgctcttaagcccctaagttcattg
cctacccatcaccctccttccgctcatcctcctcctctgcagcttatgccacaaagccag
caacttcagtcttctgcagcacaaccaccagtcctgactcagagccaaagtcttccccag
acttctggacacccacaatcaggactccattccataccaccccagcctgcttttccacag
cacacatttattcctggtggccctccttccatcacgccaccatcatgtgctcctacatct
acaacatcaatattgcctgctgcatctccaggtcttcaaccacctacacctgtatcaaat
gccacagcttcttctggcgtttgtatcccagtatctccctccccaaatccaccgccactg
cccccaatacagatcaaagaagaggcccctgatgagattgaagaacctgaaagtcctcca
cttcctcctcgaagtccatctccagagcctacagtgatagatgcacctagtcatgccagc
caatctgcaaggttctacaagcattgggatcgaggttacaactcgtgtgcaagatcagac
ctctactttattcctttgggtggatcaaagctggccaagaagagggaggaagcagctgag
aaggccaagagggaagcagaacagaaagtcagagaggaaagagaacgtgaaaaggagaag
gaaaaagagaaggaaagggaacgggagcgagagagagaagcagaaagggctgcgaaggct
tgcagttcacatgaaagccgccttggagagagtcagctgagtgctgcaactcacatcaga
ccttcttttgaaccacctccaacgaccatagctgctgtacccccttatattgggccagac
acacctgctcttcgaacccttagtgaatatgcgcggcctcatgttatgtcccccaccaat
cgcaaccatccattctttgtccctcttaaccccaatgatccactattggcttaccatatg
ccaggattgtataacattgatcctaccatgagggaacgggaattgcgtgagcgggagttg
cgggaacgtgagatccgggagagggaactgcgggaaaggatgaagcctggctttgagatg
aaaccccccgagttagatcaactccaccctgcagctaacccaatggaacattttgcacgg
catggtgcattaatcccccaaacagcaggacctcacccatttgcttctttccaccctggc
ttaaatccactagagagagagagactggctctggcaggaccacaactacggccagaaatg
agctatcccgagagactggcagctgagaggatacacgcagagcgaatggcatcactttcg
aatgaccctttggccaggcttcagatgttcaatgtcactcctcatcaccaccaacactcg
cacatacattcacacctccatctccatcagcaggaccctttacatcaagactgctgctgt
aactctaagtcttggccgggcgtggctgaaaacgggacatgtgttccagtccactttcct
gggtctgcaggtcctgttcacccactggtggatcccttggctgctgggcctcatctggca
cgtttcccatacccacctggtaccatccctaacgcgttgctgggacaacctccccacgag
cacgaaatgcttcggcaccctgtttttggtaccccttaccctcgggaactacctgcaggt
atcccacctccaatgtctgctgcccaccagcttcaagctatgcatgctcagtctgctgag
ctacagaggttagcaatggagcaacaatggttacatgggcaccctcacatgcacggtggg
cacttacccagccaagaagattattacagtcgactgaagaaagaaggggacaagcagttg
taa
DBGET
integrated database retrieval system
