Xenopus tropicalis (tropical clawed frog): 100491528
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Entry
100491528 CDS
T01011
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100491528 (tnn)
04518 Integrin signaling
100491528 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100491528 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100491528 (tnn)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100491528 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
EGF_Teneurin
EGF_TEN
fn3
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4998
Fn3_VIN3
DUF7949
EGF
Motif
Other DBs
NCBI-GeneID:
100491528
NCBI-ProteinID:
XP_017949080
Xenbase:
XB-GENE-998034
UniProt:
F6Y6E2
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All DBs
Position
4:98162894..98195742
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AA seq
1109 aa
AA seq
DB search
MKGTSRTKAIRLRNSGMDIIMSFWAVLVFLLCAPPYLLTSAAAIKTTQIDNCSSEKGLTF
THVYSSPGEENEKLQTVHSDEQNLVFRHYIHLQNPAADCEKNKLLNDLLSRLQALEVEMK
ELKEKCDGCCGGSGACHNCNGHGRFLPQLGHCQCDEGWEGDDCSTKSCPNNCAGNGKCID
GVCQCAPGYSGPDCSEKVCPFDCGKYGTCEDGSCKCAEGYTGPACRKKKCPFDCGEFGTC
VDGTCQCSEGYTGPACRKKKCPLDCGEHGKCIDGSCKCSEGYKGVDCKEKKCAVDCGPNG
RCVDGQCVCNDGFMGSSCSIEIASLCSGHGKYLMDTGGCQCDDGWEGTDCSQRSCPNNCD
NNGVCVDGVCQCFSGYTGLDCSERECPFDCGEHGSCVDGACKCSVGYTGLTCREEDCLVN
CGENGRCDGGQCFCEEGFIGEDCSEVITVQNLHLISATEDSLSIAWDMLLEVDYYLLVYY
PLDNEGLKKEIQVSVDKDTYQIMGLNPGTKYKVLMYNAKNGVTSQPAELLAKTDSISLGT
LWVAEETEDSLEVEWENPIVNVDHYKLKYAQQLNGAEREVIVSQSQDPKSRYTITGLQPS
TSYQISVQTVRSGLEGKPSTAVGVTGIDGPKNLVTTEVGEDTASLSWKGSQADIDKYMLR
YSAHDGIAEEISLGKEKISTSLSNLTPGTEYMFHLWAEKGTQQSKRTSVTAVTEIDPPKN
LQYSKSQPQASLTWNQPIAQIDGYVLVLEDSDGGQQEIQLDSTVNNFELQDLNKGLKYTV
YLLAYRGDRRSRQVTTSFYTDIDPPTNLQSFDVTQTEASLTWTPPRAKIDGYILTYTDAD
GSTEEIQLDSSSKSFAMKNLKKGLKYTVYLTAFKGDSRSSQASTIFSTVAFIITHPSDCI
QIQLSGNRQSGVYTIYPGGDTAKGVRVYCDQETDGGGWIVFQRRNSGKLDFYQRWRTYVE
GFGDPSDEFWLGLEWIHKLTSSPGNNYEIRVDLRAGDESVYAFYRNFRVGSSKDRYKLSI
SDYSGTAGDGLTYHNGWKFSTWDKDNDIALTNCALSHRGAFWYKNCHLANLNGQYGETGH
SQGVNWEPWKGHEFSVPFVEMKMRPNLKS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaccagcagaactaaagccatcagactgaggaattcaggaatggacattatt
atgtctttctgggcggttttggtgtttctcttgtgtgcccccccttatctgctgacttct
gctgctgctataaaaactacccaaattgataattgtagcagtgagaaaggcctcacattt
acccatgtgtatagcagccctggcgaggagaatgagaagcttcaaacagtgcattcagat
gagcagaatcttgtctttaggcattatatccatctccaaaaccctgcagcagactgtgag
aaaaacaagctacttaatgacctgctgtccagactacaagctttagaagtggagatgaaa
gaattaaaggagaagtgtgatgggtgctgtggaggatcaggggcctgccataactgcaat
ggacatggaaggtttcttccacaattgggtcattgccagtgtgatgaaggctgggagggg
gatgactgttctacaaagagttgccctaacaactgtgcagggaatgggaaatgtattgat
ggtgtttgccagtgcgcaccaggctatagtggtccagactgcagtgagaaggtgtgtccc
tttgattgtggtaagtatggaacatgtgaagatggctcctgtaaatgtgcagaagggtac
actggcccagcatgtagaaagaaaaaatgtcccttcgactgtggtgaatttgggacttgt
gttgatggtacctgccagtgctcagaggggtacactgggccagcatgcagaaaaaagaag
tgtcctttagactgtggtgaacatggaaagtgtattgatggatcttgcaaatgttcagag
ggatacaagggcgtggactgcaaagaaaagaagtgtgctgttgactgtggccccaatgga
cgatgtgttgatggacaatgtgtttgcaacgatggtttcatgggaagcagttgttcaata
gaaatcgctagtctctgcagtggacacggcaagtacctaatggacactggtggttgtcag
tgtgatgatggctgggagggaactgactgttcacagagaagttgtccaaataattgtgac
aataatggggtatgtgttgatggagtatgccagtgcttcagtggttacactggcctagac
tgcagtgagagggagtgtccatttgattgtggagagcatggcagttgtgttgatggagct
tgcaagtgctcagttggatacaccgggctgacttgcagagaagaagactgccttgtgaat
tgtggtgaaaatgggcgctgcgatggtggccagtgcttctgcgaggagggatttattggg
gaagattgttctgaagtgattacagtgcagaatttacatttgatcagtgctacagaggat
tcactgagcatcgcttgggatatgttgcttgaagtggattattacttgcttgtatattac
cccttggacaatgaaggcttaaaaaaggaaatacaagtatctgtagacaaggatacatac
caaatcatgggtttgaatcctggtaccaaatataaggtgctcatgtacaatgcaaagaat
ggagtgaccagccagccagcagaactgcttgccaaaacagatagtatttcactggggact
ctgtgggttgcagaagagacagaagactctttggaagtagaatgggaaaatcccattgta
aatgtggatcattacaaactgaagtatgctcagcagctgaatggggctgagagagaagtt
atagtgtcacaaagccaagaccctaagagcaggtacaccatcacaggtctgcagcctagc
acatcctatcagataagtgtccagactgtcagaagtggtctagagggaaagccatctact
gcagttggggttacagggattgatggtcctaaaaatttagtgaccacagaggtgggtgag
gatacagccagcctgtcctggaaaggatcccaagcagacatagataaatatatgctgaga
tattcggcacatgatgggatcgctgaagagatatccttgggcaaagagaagatttcaaca
tctctgagtaacctaacgcctggcacagaatacatgtttcatctgtgggcagaaaaaggc
acccaacaaagcaagagaaccagtgtcacagcagtgactgagatcgacccaccaaagaat
ctgcaatattctaaatcacaaccgcaagcctctcttacctggaatcaacctattgcacaa
attgatggctatgttttagtcttggaagactctgatggaggccagcaggagattcagctg
gattctacagtaaataattttgaactacaagacctgaataaagggctaaagtacacagtc
tacctgctagcttatagaggagaccgtcggagcagacaagtcaccaccagcttttataca
gatattgaccccccaacaaacctgcaatcttttgatgttacgcagactgaagcctccctc
acgtggactccaccaagggcaaagatagatggctacatactcacttatacggatgcagat
ggcagcacagaggagattcagctggattcttcaagtaaaagttttgccatgaaaaacttg
aagaaaggattaaagtacacagtttacttgacagctttcaaaggagacagtaggagcagc
caggccagtaccatattcagtacagttgcctttattatcacccacccatctgactgcatt
caaatccaactaagtggaaacagacaaagtggtgtatacactatctacccaggtggtgat
acggcaaaaggagtcagagtttattgtgatcaagagactgatggtggaggatggattgtc
tttcagagaagaaacagtggaaagcttgacttttaccagcgatggagaacttatgtggag
ggatttggtgatccaagtgatgaattctggcttggtcttgagtggatacataagctgact
tcttctccaggcaataactatgaaatacgtgtagatctgcgtgctggggatgagtcggtc
tatgctttttaccgcaatttccgggtgggctcttcaaaagacaggtataaactgtccatc
agtgactactctggcactgcaggtgatggacttacatatcacaacggctggaagttcagt
acatgggacaaagataatgacattgcacttactaactgtgccctctcacatcgtggagcc
ttttggtataaaaactgtcaccttgccaacctgaatgggcagtatggagaaactggtcac
agccagggtgtaaattgggagccatggaaaggacatgagttttctgtcccctttgttgaa
atgaagatgcgtcccaatctaaagtcctag
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integrated database retrieval system
