Xenopus tropicalis (tropical clawed frog): 100491530
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Entry
100491530 CDS
T01011
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491530 (lrp12)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100491530 (lrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
LDLRAD1_C
Motif
Other DBs
NCBI-GeneID:
100491530
NCBI-ProteinID:
XP_002931586
Xenbase:
XB-GENE-980112
UniProt:
A0A6I8SMS0
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Position
6:complement(132169005..132190821)
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AA seq
844 aa
AA seq
DB search
MGLNRNALPGWTSLQLLLLLAFRGNDALESADNVHVSELPVACGGIPEQIRDKSGIITSP
GWPADYPARINCSWYIRASPGEKITIRFQEFDLQGSSTCSFDWVTIGPSQNYDGARACGS
TIPAPYTSLQDHVWIKFHSDEHVSRKGFCLSYLAEKKKCESDRFRCDNGKCIPEILRCNR
MDDCGDGSDEKLCAKANRPTLSSFQPCTVSQFQCLSRFTKAYTCLPNSLKCDGNIDCLDL
GDELDCDVPSCGQSLKYFYGAFSSPNYPDFYPPGSNCTWLIDTGDRRKVILRFTDFKLDG
TGYGDYVKIYDGLEENPRNLLRVLTAFDSHAPLTVVSSSGQIRVHFCADKVNAARGFNAT
YQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDELNCTMCQKDEFPCSRNGVCYP
RSDRCNYQNHCPNGSDEKNCYFCQPGNFHCKNNRCVFESWVCDSQDDCGDGSDEENCPVI
VPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEADLLRREAPPS
YGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRSQLGFTSIRLPIAGRSSNIWNRIFN
FVRSSNSSSLALVSTDGDNGASQSTGRDGDRSSSHRGRHSVESDTDTENERRDTQGAVGG
VVASLPRKTPPVAAVEATVNANGGSSTQTSNNTTDNPRDTPSSEPSAVSPARQQLSSALS
RMTQGLRWVRITLGRSSAASQNQSPLRQLDSSGNGREEDDDVEMLIPAVDIDLSDCSRPL
LDIASEQGQGNCQAHSARHQGIRPCSRDGPCECCGIVHTAQIPDTCLEAVLKNETSDDEA
LLLC
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgggactgaacagaaatgctctgccgggctggacttcccttcagctgcttctgctgctc
gccttccgggggaatgatgcccttgagagtgcagacaatgttcacgtgtcggaactgcca
gtagcttgtgggggaattcctgaacagatcagagacaaaagtggcataatcacaagccct
gggtggcccgcagactacccagcaaggatcaactgtagttggtacatccgagccagccca
ggggaaaaaattactatcagatttcaagaatttgatcttcagggatcttccacgtgtagt
tttgactgggtgactataggaccttcccaaaattatgatggcgccagggcatgtggatct
acaattcccgcaccatacacctccttacaagaccatgtgtggataaaattccattcagat
gagcatgtttccagaaagggcttttgcttgtcatatttggctgaaaagaagaaatgtgag
agcgaccgattccgttgtgacaacggaaaatgcattccagaaatattaaggtgtaatcgt
atggacgattgtggagacggatctgatgaaaagctttgtgccaaagccaatcgacccacg
ctgtcttcatttcagccttgcacagttagccagtttcagtgtctgtcgcgcttcactaag
gcctacacgtgcctaccaaactccttaaagtgtgatgggaatatcgactgcctggatctg
ggtgacgagttagattgtgatgtcccttcctgcgggcagtcattgaaatatttctatggc
gctttcagttcaccaaactatccagacttttatccacctggcagtaactgtacatggctc
atagatactggtgatcggcgcaaggttattctgcgttttactgactttaagttagacggt
actggttatggggattatgtaaaaatatatgatggactggaagaaaatccacgtaatctc
ctgcgagttctgactgcttttgattctcacgcaccacttacagtagtttcttcctctgga
caaatcagagtccatttttgtgcagataaagttaatgcagccagagggtttaatgcaaca
tatcaggtggatggcttctgcttgccttgggagataccttgtggtggcaactggggctgt
tacactgaacagcagcgatgtgatggctactggcattgcccaaatggcagggatgagtta
aactgtaccatgtgccaaaaagacgagtttccgtgctctaggaatggtgtctgttaccca
cgttcagaccggtgcaactaccagaaccattgccctaatggctctgatgagaaaaactgc
tacttctgtcagccgggaaacttccattgtaaaaataaccgctgtgtctttgaaagctgg
gtctgtgattctcaggatgactgcggggacggcagcgatgaggagaattgccccgtaatt
gtccctacaagagtcatcactgctgcagtcattgggagtcttatctgtggccttctcctt
gtcattgcattggggtgcacgtgcaagctttactctctgcgcatgtttgaacgcagatct
tttgagacacaactttcaagagttgaagccgatttactgaggcgggaggcccccccttct
tatgggcagttgattgcacaaggcttaattccgccagttgaagacttcccagtatgttcc
ccgaaccaggcttcagttttggaaaatctgagacttgccgtccgctcccagcttggattc
acatctattagactgccaatagctggcaggtcaagcaacatttggaatagaattttcaat
tttgtgcgctccagcaattccagctccttagcgttggtctccaccgacggagacaatggc
gcgagccagagcacaggcagagacggggatcggagcagctcccaccgagggcgccactca
gtggagtctgatactgatacagaaaatgaaaggagggatacacagggagcagtcggggga
gtcgttgcctctttaccccgcaaaactcctcctgttgctgctgtagaagccacagtaaat
gcaaatggagggagttctactcagacttccaataacacaacagataacccaagggacact
ccttcctcagagccctcggctgtcagtccggcacgtcagcagctcagtagcgccctcagc
aggatgactcaaggattgcgttgggtacgaattactcttgggaggtcaagcgctgcaagc
cagaaccaaagtcctctaaggcagcttgacagcagtgggaatggcagagaggaggacgac
gatgtagaaatgctgatcccagcggtagacattgatctcagtgactgtagcagaccactg
cttgatattgcatctgaacaggggcaggggaactgccaggcacacagtgccaggcatcaa
ggaataaggccatgcagccgcgacggcccgtgcgaatgctgcggcattgtacatacggct
cagatccctgacacctgcttggaagctgtgctcaaaaatgagactagcgacgacgaggcg
cttctactctgttag
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