Xenopus tropicalis (tropical clawed frog): 100491582
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Entry
100491582 CDS
T01011
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
xtr04137
Mitophagy - animal
xtr04144
Endocytosis
xtr04340
Hedgehog signaling pathway
xtr04350
TGF-beta signaling pathway
xtr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100491582 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100491582 (smurf1)
04350 TGF-beta signaling pathway
100491582 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100491582 (smurf1)
04137 Mitophagy - animal
100491582 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
100491582 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491582 (smurf1)
04121 Ubiquitin system [BR:
xtr04121
]
100491582 (smurf1)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100491582 (smurf1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100491582 (smurf1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100491582 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100491582 (smurf1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
HECT type E3
100491582 (smurf1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100491582 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
100491582
NCBI-ProteinID:
XP_002931540
Xenbase:
XB-GENE-479046
UniProt:
A0A6I8SVL3
LinkDB
All DBs
Position
9:complement(47051906..47097195)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNAVTRRGGSSIRVRLTVLCAKNLAKRDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKMDSITISIWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPADSDAVRGQIVVSLQTRDRIGTVGSVVDCRGLLDNDGALYEDAGPGRPLSCFMDEPA
PYTDGPGAAGGGPCRLVESPGQEQRLQAQRLRGPEVREHVQTPLNRSHGYQSQDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDDLGPLPTGWEVRTTVSGRIYFVDH
NNRTTQFTDPRLHHIINHQSQLKEPNNAIPVQSDGSLEEGDEFPTQRYERDLVQKLKVLR
HELSLLQPQAGHCRVEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITSVLDHTFCVEHNAFGRLL
QHELKPNGKNLQVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFEQK
ELELIIGGLDKIDISDWKANTRLKHCLANSNIVQWFWQAVESFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETSGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgctgtgactcggagaggtggatcgagtatcagagttcgtctgacagtttta
tgtgcgaagaacctagcaaagagggattttttcagattacctgacccatttgctaaaata
gttgtggatggatctggtcagtgccactcaactgacactgtaaagaacacattagaccca
aagtggaatcagcattatgacctatatgttggtaaaatggattcaattacaatcagtatc
tggaatcataagaaaattcacaagaaacagggagctggcttcctggggtgtgtgagatta
ttatccaatgccattagcagattgaaagacacaggctaccagcgcttggatctatgcaaa
ttaaatcccgcagatagtgatgctgtacggggccaaattgtagtcagtttgcagacacga
gacaggatcggtacagttggctctgttgttgattgcagaggactgctagacaatgatgga
gcactttatgaagatgctgggcctggcaggccccttagttgtttcatggatgagccagcc
ccttatactgatggaccaggtgcagctggaggagggccctgtaggctagtagaatcgcca
ggtcaagaacagagactccaagcacagagacttcgtggaccagaagttagagagcatgtc
cagacacctttaaatcgatcccatgggtaccagtcacaggacttgcctgaaggttatgaa
caaagaactacggttcaagggcaggtgtatttcttgcacacacaaactggtgtcagcaca
tggcatgatccccgaataccaagagaccttaacagtgtgaattgtgatgaccttggccct
ttgcccactggatgggaagtcagaaccactgtgtctggaagaatatactttgtagaccac
aataatcgaacaacgcagttcacagacccaagactacatcacatcataaatcatcagtcc
cagctaaaagagccaaataatgctataccagtgcagagtgatggatctttagaagagggg
gatgaatttcctactcaaagatatgagagagacttggtacagaaacttaaagtcctgaga
catgagttatcattgctgcagcctcaggcagggcactgccgtgttgaagtgtcaagggaa
gaaatttttgaggagtcctataggcagataatgaagatgagaccgaaagaccttaagaaa
agattgatggtgaaatttcgtggggaagaaggacttgactatggtggagtggccagggag
tggctgtatttactatgccatgaaatgctgaatccatattatggacttttccaatattct
acagacaatatttatactctgcaaattaatcctgattcatctattaatccagatcattta
tcttatttccattttgttggtcgaatcatgggattggctgtgtttcatggacactacatt
aatggggggtttacagttcctttctacaaacaacttttgggaaagcccattcagctgtct
gacttggaatctgtggatccagagctgcataaaagcttggtttggattttagagaatgac
attacttcagtattagaccacacgttctgtgttgagcacaatgcatttggccgactcctc
cagcatgaattgaaaccaaatggcaagaacttacaagtaacagaagaaaataagaaagag
tatgtgaggttgtatgttaattggaggttcatgagagggatagaggctcagttcttggct
ctgcagaaaggttttaatgagctaataccacaacatttgttgaagccatttgagcaaaaa
gaactagagcttattattggaggcttggataaaattgacatcagtgactggaaggcaaac
actagactaaaacactgcttagctaatagcaatattgttcagtggttctggcaagcagtg
gagtcgtttgatgaggaaagaagggccagacttctgcagtttgtcacgggctctacgcgt
gttccacttcagggctttaaagctcttcaaggttctacaggtgctgctggacccagactt
tttactattcatctgattgatgccaacacagataaccttccaaaggctcacacgtgcttt
aaccgaattgacattcctccttatgaatcctatgaaaagctctatgagaaattattaaca
gctgtagaagagactagtggttttgctgtggaataa
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