Xenopus tropicalis (tropical clawed frog): 100491658
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Entry
100491658 CDS
T01011
Symbol
rbm12b.3
Name
(RefSeq) RNA-binding protein 12B
KO
K24526
RNA-binding protein 12
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100491658 (rbm12b.3)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100491658 (rbm12b.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100491658
NCBI-ProteinID:
XP_002934460
Xenbase:
XB-GENE-22063331
UniProt:
A0A803K902
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All DBs
Position
6:complement(127708634..127720665)
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AA seq
659 aa
AA seq
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MAVVIRLQGLPVVAGSTDIRHFFSGLHIPDGGVHITGGKIGEAFIIFATDEDARRAMSRS
GGFIKKSRIELFLSSKAEMQHTLEMNRKGNKDLGPTPDISKLLNVMKKGIYQKNMANKSN
VEAGFDSSGAKYTEENMPRPKYQGKKDIWPLKDNGYGYVFLYGLPYTASELDVKEFFHGF
NVVDLHFSVRQNGVRDGNAYVKFGSVQDAQAALSRDNEYIGHRYICVKLCNEQKWIEAGG
PTDERNESVRKNRQWSPRFPSKNHSRSRSPKIHRTRSRSPHNQQFYLHLLNMSYSVQKTD
IKLFFGDPDIPDTQIKLLLDRNGVQTREGFVLIKNEKFYQKCLGLHKGLLNGREVWVYPI
ARKDMLELIESSERQQLERNTSEDPSPKKKFRDRSNLKRYMYLRNFPFNVSKSEVQKFFA
GFPVDEQDIFLLYDSRGVGLGEALVTFPSEHQAILAEGLNQQKFLGTEVLLRRISEEQMK
ELGAFPEDHNEREPKRSTSYRDEYLEPAEQGFEVSDYGHRSYDQPRPYRDDDFGHGSGSI
RRSPERLRSPYDMNQDEPYGRFHMGNQNVEDYKSGPINRPRSGGASIRLKNVPYTATIEE
ILDFFYGYNVVPDSVEMDYNCKGTAIVHMENYDEAAAAVNELNERPIGPRKVHMSIIRS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatccgcttacaggggcttcctgttgttgctggctcaactgatatccgt
catttcttttctggattgcatattcctgatggaggagttcatattactggtggaaagatt
ggggaggcctttattatatttgctacagatgaagatgctcgacgggctatgagtcgctca
ggaggcttcataaagaaatcacgaattgagctttttctcagtagtaaggcagaaatgcaa
catacccttgagatgaataggaaaggaaacaaagacttggggccaacacctgatatttca
aaactgctaaatgtcatgaagaaaggtatatatcagaagaacatggccaataaaagtaat
gtagaagctggttttgatagcagtggtgcaaagtacacagaagaaaacatgccaaggcca
aaatatcaagggaagaaagacatatggccattaaaagataatggttatggatatgtattt
ttatatgggcttccatacacagcgagtgaacttgatgttaaagaattttttcatggtttc
aatgtggtagatttgcacttttctgttcgtcaaaatggagttagagatggaaatgcctat
gttaaatttggcagtgttcaggatgcacaggcagctctttcacgtgataatgaatatatt
ggtcatagatacatttgtgtaaagttgtgcaatgaacaaaagtggattgaagctggtggc
ccaactgatgaaagaaatgagtctgttcgtaaaaatagacagtggtcacccagatttcct
tcaaaaaatcattcaaggtccagatctccaaagatacacagaacaaggtcacgctcgccc
cataatcagcagttctacttacacctcttaaacatgtcatattctgtgcagaagacagat
attaaattgttttttggtgatccagatattccagatacacagatcaaactcttattagac
agaaatggtgtccagacaagagaaggatttgttctgatcaaaaatgaaaagttttatcag
aaatgtcttggcttacacaaaggccttttaaatggccgtgaagtttgggtataccccatt
gccagaaaggatatgttggagttaattgaatcctcggagagacaacaactagaaaggaac
acctcagaagacccttctccaaaaaagaaattcagagaccgttcaaacctcaaaagatat
atgtatttgagaaactttccttttaatgttagtaaaagtgaggttcaaaaattctttgct
gggtttccagtggatgaacaagatatttttttgctgtatgatagtagaggcgttggtctt
ggtgaagcactagttacttttccgtcggagcaccaggctatccttgctgagggcttgaat
cagcagaagttcttgggaacagaagtgttactaagacgcatctcagaagaacaaatgaaa
gaacttggagccttccctgaggatcacaatgagagagaacctaaacgatcaactagttat
agagatgaatatctagaacctgctgaacaaggatttgaggtatctgattatggacaccgt
tcatatgaccaaccccgaccttatagggacgatgactttggacatggttctggaagcata
aggcgctctccggaaaggttgagaagcccatatgacatgaatcaagatgaaccttatggg
aggtttcatatgggaaaccagaacgttgaagactataaatctgggccaataaatcgacca
aggtcaggtggagcgtcgatacgcttgaaaaatgttccatatactgctactattgaagaa
attttagatttcttttatggctataatgtggttcctgattctgtagaaatggattacaac
tgcaaaggaacagctatagtgcatatggaaaactatgatgaagccgcagctgctgttaat
gaactaaatgaaaggcctataggaccacgtaaagttcatatgagcattataaggagctaa
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