Xenopus tropicalis (tropical clawed frog): 100491659
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Entry
100491659 CDS
T01011
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491659 (ppfia3)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100491659 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
100491659
NCBI-ProteinID:
XP_012823004
Xenbase:
XB-GENE-6040150
UniProt:
A0A8J0SJN2
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All DBs
Position
7:complement(117895751..117986981)
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AA seq
1214 aa
AA seq
DB search
MMCEVMPTINEDNRRGSTYSSDDANFEQLMVNMLNERERLLDTLRETQESLATAQLRLRE
LGHEKESLQRQLNIALPQEFAALTKELNLCREQLLEREEEISELKAERNNTRLLLEHLEC
LVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVA
VLEEELEMSSQESIALREQLARRRSGIDDGGKDGDTPSSTILNGSSHLELRGGRESELEE
MLEKQRLELCQLKERLTMMCRQMAELEEELNTAQKDLIKSEEVNAKLQRDLKEALAQRED
MEERITTLEKRYLSAQREATSLHDVNDKLENELASKESLYRQSEEKNRQLQEWLEDAKQK
LQQTLQKAETLPEIEAQLAQRVAALSKAEERHGNFEERLRQLEAQLEEKNQELQRARQRE
KMNDEHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNTLSEEIANMKKLQDELLLNK
EQLVAEIERMQLEIDQLRGRPSSTYSRSLPGSALELRYSQAPTLPMGSHVDHYGSTAVIR
RPKKGRWAAMKDDPSKTRTLDEQDWERAQQANVLANVAQAFEADLDGSDEDDRDTIFSSA
DLLSPSGQTDVQTLAIMLQEQLEAINKEIKLIQEEKETTELRAEEIESRVTSGTLDGSLG
RYRSASSIPTSVTTSTLASPSPPSSGHSTPRITPHSPAREGDKFNHLPKEDSRDEKALMQ
CETTAPLTPRAVRLERMTQALALQASSLEDGRDQRASLAADGLGGTNSTSQDSLHKAAKK
KSIKSSIGRLFGKKEKGRMGQMGRESSSAAGTPSEETSPADPMGLSKLGGPVDKDRRNKK
KHELLEEACRQGLPFAAWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQ
REIGISNPLHRLKLRLAIQEMVSLTSPSAPATSRTSTGNVWMTHEEMETLTATTKPETKE
ISWEQILAYGDMNHEWVGNDWLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVD
SFHRVSLHYGIMCLKRLNYDRKELERRREESQNQLKDVMVWSNERVMCWVQAIGLKEYAN
NLQESGVHGALIALDDTFDFNDLALLLQIPTQNTQARQVLEKEFSSLISMGTERRLDEDS
AKTFSRSPSWRKMFREKDLRGVSPDSAEMLPPNFRTAAVSSITSPAVQLRKMQSEGSTST
SPRADNVSVRTYSC
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgcccactattaatgaggacaaccgccggggctccacttatagc
tccgatgatgctaactttgagcagctgatggtgaacatgctcaatgagcgggaacgacta
ttggacacgctccgggagactcaggagagccttgccacggctcagttgcgcttgcgcgaa
ttgggccacgagaaggagtccctacagaggcagctgaacattgcactgccacaggagttt
gcagccctcaccaaggagctcaacctgtgccgggagcagttgttagaaagagaggaggag
atttccgagctgaaggctgaaaggaacaacactaggctgctgctggagcatttggagtgt
ttggtgtcccggcatgagcgatctctgagaatgacggtggtcaagaggcaagcacagtcg
cccgctggcgtctccagcgaggtagaagtcttaaaagccctcaagtccctctttgagcac
cacaaggcccttgatgaaaaggttcgggagcgccttcgtgtggccctcgagagggtggca
gtactggaagaagaactggagatgtctagccaagagtctattgcacttcgggagcagctt
gcaaggagaagatcaggaattgatgatgggggtaaagatggcgatacaccaagctcgacc
atactaaacggctcctcccacctggaactgcgaggaggcagggaatcagagctggaggag
atgctggagaaacagaggcttgagctgtgccaattaaaggagcggttgaccatgatgtgc
cgtcaaatggcggaacttgaagaagagctaaatacagcccagaaagatctcataaaatct
gaagaggtcaatgccaagctccaaagggacctcaaggaggctctggcacaaagagaagat
atggaggaaagaataactactctggagaaacgttaccttagtgcacagagagaagccact
tcgctccatgatgtcaatgacaagctggagaatgaactggcaagcaaagaatccctttac
agacagagtgaagagaagaaccggcagcttcaggagtggctggaagacgccaagcagaaa
ttgcagcagaccctgcagaaggcggagactttgccagagatcgaggctcagctggcgcaa
cgagtggcagcactcagcaaggctgaagagcggcatggaaattttgaggagagactccgt
cagctcgaagcgcaactggaagagaagaaccaggagttacaacgggcacgtcagagggag
aagatgaacgatgagcacaacaaacgtctctctgagacggtagataaactcctgtctgag
tcaaatgaacggctgcagctgcatctaaaggagcggatgggggccctggaagagaagaac
actctctcggaagaaatagctaacatgaaaaagctacaggatgagctccttctcaataag
gagcagcttgtggcagagattgagaggatgcaactggaaattgaccagctgagaggacga
ccttcttccacatactccaggtctctcccaggcagtgccctggaactgagatactcgcag
gcaccgacactccccatgggcagccatgtcgatcactacggtagcacagcagtcatcagg
cggcctaaaaaagggcgctgggcagccatgaaggatgatccatctaagactcggacactg
gatgagcaggactgggagcgtgcccagcaggccaacgtgttggctaatgtggcccaagcc
tttgaagctgacttggatggctctgatgaagatgacagagacactattttcagctcagcg
gacctgctgtctcccagtggtcagacagatgtacagacgctcgcgatcatgttacaggag
cagcttgaagccattaacaaagagataaagttaatccaagaggaaaaggagacaacagag
ttgcgggctgaagaaatagagagtcgagtgaccagcggcactctggacggatcactggga
cgctaccgttctgccagttccatccccacctccgtcaccacatcaactctagccagtccc
tcaccacccagcagtgggcattccaccccgcgcatcacgccacacagccctgccagagaa
ggagacaaatttaatcaccttccaaaagaggacagtcgtgatgaaaaggcattaatgcaa
tgtgagaccaccgctccacttactccacgggcagtgaggttggaaagaatgacacaggct
ctggctctccaagccagctcgctggaggatggaagagatcaacgggccagcttggcagca
gatggtctgggagggacaaacagtaccagccaagattctctacataaggctgctaaaaag
aagagcatcaagtcctccattggacgcctgtttggcaaaaaggaaaaggggcgcatggga
cagatgggccgtgaatcctcttccgctgccggaaccccctcagaggagacctccccagct
gaccctatgggtctgtccaaattgggcggacctgtggataaagatcgcaggaacaagaag
aagcatgaactgctggaagaagcctgccggcagggacttcctttcgctgcctgggatgga
cccactgttgtttcatggttggagctatgggtaggcatgcccgcctggtatgtagcagct
tgccgtgctaacgtaaaaagtggagctatcatggccaacctttctgatacagaaatccag
cgggagattggcatcagcaaccccctccatcggctgaaactgcgccttgctatccaggag
atggtatcgctcactagtccctccgcaccggccacctcacgtacgtcgacaggtaatgtg
tggatgacccacgaagagatggagaccctgacagcaaccactaaaccagagactaaggaa
atcagctgggaacagattctggcgtatggtgacatgaaccacgaatgggtgggcaacgac
tggctgccaagtctcggtttgccccagtaccgtagctatttcatggaatcattggttgat
gcaagaatgttagaccacttgaataaaaaggagttgcgaggacaactcaaaatggtggat
agttttcacagagttagcctccactatggtataatgtgcctaaagagactgaactatgac
aggaaggagctggagaggagaagagaggagagtcagaaccagctgaaagatgtgatggtt
tggtctaatgagcgagtaatgtgctgggtgcaagccattggattgaaggaatatgccaac
aacctccaggaaagtggtgtacatggagctctcatagcattggacgacacatttgacttt
aatgacctggcgttgttactacagatcccaacacaaaacacacaggctcgacaagttcta
gaaaaggagttcagcagtttaatttcaatggggacagaacgaaggttggacgaggacagt
gccaagactttcagtcgctctccttcctggaggaagatgttccgtgagaaggacctgcga
ggagtcagtcctgattcagcggaaatgctgccgccaaatttccgcacagcggccgtctcc
tccattacctcacccgccgtacagctccgtaagatgcagtctgaaggaagcacttccacc
agcccacgtgcagacaatgtctcagtcagaacttattcctgttaa
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