Xenopus tropicalis (tropical clawed frog): 100491789
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Entry
100491789 CDS
T01011
Symbol
rbpj
Name
(RefSeq) recombining binding protein suppressor of hairless isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100491789 (rbpj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100491789 (rbpj)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Other transcription factors
Others
100491789 (rbpj)
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Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
100491789
NCBI-ProteinID:
XP_017945079
Xenbase:
XB-GENE-490756
UniProt:
A0A803J8V4
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Position
1:32003131..32065720
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AA seq
487 aa
AA seq
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MAPVVTGKFGERPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGSGWKKKKEQMERDGCSEQESQPCAFIGIGNSDQEMQQLNLEGKNYCTAKTLYISDS
DKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKEPNKEMINDGASWTIISTDKAEYTFYEGMGPVNAPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTSLTFTYTPEPGPRPHCSAAGAILRANSSLLASNESNTNSEGSYTNVSTNSANVTS
STAAVVS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagtttggggagaggcctcaacccaaacgtctcacgagg
gaagcaatgaggaattatttgaaagaaaggggcgatcagactgtacttatccttcatgct
aaagttgcacagaaatcatatggcaatgagaaaaggtttttttgtccccctccctgtgtc
tatctcatgggcagtgggtggaagaaaaagaaagagcagatggagagagatggctgctca
gagcaagaatcccagccctgtgctttcattggcattggcaacagtgaccaagaaatgcag
cagctgaacctggaaggaaagaattattgcactgccaaaacattgtacatatcagactca
gacaagagaaagcacttcatgttatcagtaaagatgttctatggcaatagtgatgatatc
ggcgtgtttttaagcaagagaattaaggtcatctccaagccatcaaaaaagaaacagtcg
ctgaaaaatgcagacttatgtattgcgtcagggacaaaagtggcactatttaaccggctg
cgatcacagacagtcagcacaagatatctgcacgtagaaggcggcaacttccacgccagc
tcgcaacagtggggagctttctacattcaccttttggatgacgaagagtctgaaggagag
gaattcacagtgcgtgacggttacattcactatggacagacggtgaagcttgtatgttcg
gtaactggcatggcactcccacgactgattatccgcaaagtggataaacagacggcattg
ttagatgcagatgatcctgtatcccagctccataaatgtgcattttatctgaaggataca
gaaagaatgtacttgtgcctttctcaggaaagaattatccagtttcaagccactccatgt
cccaaagaaccaaataaagagatgattaacgatggtgcctcttggacaatcattagcaca
gataaggcagaatacactttctatgaaggcatggggccagtaaatgctccagtgactcca
gtgcctgtagtagaaagccttcagctgaatggtggaggagatgtagcaatgctggagctc
acaggacagaatttcactccaaatttacgtgtttggtttggggatgtggaagccgagact
atgtacaggtgtgcagaaagcatgctgtgtgttgttcctgacatttccgcatttcgagag
ggttggagatgggtccgtcagccagtgcaggtgccagttacattggtccggaacgatggt
ataatctattcaaccagccttacatttacatacacgccagagcccgggcctagaccacac
tgcagtgcagctggagcaatcctacgagccaattcaagtctcctggcatccaatgaatcc
aacacaaacagcgagggaagttacacaaacgtcagcacaaattcagccaatgtcacatca
tccacggcagcagtagtgtcctaa
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