Xenopus tropicalis (tropical clawed frog): 100491803
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Entry
100491803 CDS
T01011
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04150
mTOR signaling pathway
xtr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100491803 (lrp5)
04150 mTOR signaling pathway
100491803 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491803 (lrp5)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100491803 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
100491803
NCBI-ProteinID:
XP_002941689
Xenbase:
XB-GENE-485117
UniProt:
A0A6I8T0P8
LinkDB
All DBs
Position
4:complement(37120364..37236267)
Genome browser
AA seq
1603 aa
AA seq
DB search
MGILPGVSLLFCYCLASSWGSPLLLFANRRDVRLVDAGGTKLESVVVVSGLEDAAAVDFL
YSQGVIYWTDVSEESIKQTLYNQSSNLQTVVISGLVSPDGLACDWIGKKLYWTDSETNRI
EVGNLNGTYRKVLFWQDLDQPRAIALDPAHGYMYWTDWGDTPRIERAGMDGSMRKVIVDT
DIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHPFALTLAGDTLYW
TDWQTRSIHACNKRTGEKRREILSSLYSPMDIQVFSKERQPYFPTPCDESNGGCSHLCLL
SPREPFYSCTCPTGVQLTQDGKTCKTGADDVLLLARRTDLRRISLDMPDFTDIVLQIDDI
RHAIAIDYDPVEGYIYWTDDEVKAIRRAYLDGSGAQTLVTTEVQHPDGIAVDWVARNLYW
TDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLHPLTGYMYWTDWGENPKIESAYLDGS
ERMVLVNSSLGWPNGLALDLQDGKLYWGDAKTDKIEVINVDGSNRKTLLEDKLPHIFGFT
LLGDYIYWTDWQRRSIERVHKVRASREIIIDQLPDLMGLKAASVSNTFGTNPCADNNGGC
SHLCFFSPRGVRCSCPIGLELLSDMRTCIIPEAFLVFTSRATIHRISLETNNNDVAIPLT
GVKEASALDFDVSDNRLYWTDITLKTISRAFMNGSSVEHVIEFGLDYPEGMAVDWMGKNL
YWSDTGTNRIEVSRLDGLYRQVLVWKDLDNPRSLALDPAKGYMYWTEWGGKPRIVRAYMD
GTNSIILVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGAERVIIADDLPHPFGLT
QYSDYIYWTDWNLHSIERADKLNGNNRTLIQDHLDFVMDILVFHSSRQDGLNDCMQNNGH
CSQLCLAVPKGYKCSCSSHYTLDSNNRNCSPPSNFLLFSQKTAINRMLLDEQQSPDITLP
IHGLRNVKAVSYDPLDKLIYWVDGRQNIIKRAKDDGTQPFVVVSTPNQSQTPEKQPHDLS
IDIYSHTLYWTCEGTNTINANKLNGESIGVVLRGDHDKPRAIAVNAERGYLYFTNMQERS
PKIERAAFDGTEREVLFSTGLIRPVALVVDNKLGKLFWVDADLKRIESSDLSGANRVTLE
DSNILQPMGLTILGDHLYWIDKQQQMIERVEKTNGIRRTKIQGRIAHPTGIHAVESVDMN
EFSAHPCSRNNGGCSHICITKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPEQFTCATGD
IDCIPMAWRCDGFSECDDNSDEENCPVCSSNQFQCEKGQCIDARQKCNGEIDCQDKSDEL
DCDSICLPDQFRCANGQCIMMSQQCDTFPDCSDSSDELICDKPPSEKTPSHSSAIGPVIG
IILSVFVMGGLYFVCQRVVCHRYTGPNGPFPHEYISGTPHVPLNFITTRSSQPNTYTGIS
YGKPMIGSMSIMGGSSGAPLYDRNHVTGASSSSSSSTKATLYPQILNPPPSPATDRSLYN
TEVFYSSNSPSTTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWKANKYYMDLNSDSDP
YPPPPTPRSQYMSAEESCPPSPTTERSYFHLYPPPPSPCTDSS
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggggattctcccgggagtctcgctgttgttttgctactgcttggcgtcttcttggggt
tctcctttattgctttttgccaaccgaagggatgtccgattggtcgatgctggtggaaca
aaactggagtctgttgttgtggtgagcggcttggaagatgcagctgctgttgactttctc
tattcacaaggtgtcatttactggacggatgtaagcgaagagtctattaaacaaacattg
tataaccagagttctaacttacaaactgtagttatctctggcttggtgtcccctgatggc
cttgcttgtgactggattggcaagaagctttattggacagactctgaaaccaaccggata
gaagttggaaacctcaatggaacatacagaaaagtcctcttctggcaagatctggatcag
ccaagggcaattgctcttgatcctgctcatggatatatgtactggacagattggggcgac
accccacggatagaaagagctggtatggatggcagcatgcgcaaagtcatagtagacaca
gatatttattggcccaatggactaacaattgatttagatgagcaaaagctttactgggca
gatgcaaaactgagttttattcatagagctaatttggatgggtcatttagacaaaaggta
gttgaaggaagcctcacacatccatttgctctgacgctggccggagacaccttgtattgg
actgactggcagacaagatcaattcatgcctgcaacaaacgcacaggggagaaaaggcga
gaaattctcagttccctctactctcctatggacattcaagtgtttagtaaagaaaggcag
ccgtacttccccaccccatgtgatgaatcaaatggtggctgttctcacctttgtcttttg
tccccaagagagcccttttatagctgtacatgtcctacaggagttcaactgacacaggat
ggcaaaacttgcaaaacaggagctgatgatgtcctactgctcgcacgaaggactgacctt
cggaggatctcattagacatgccagatttcacagacattgtcctgcaaattgatgacatc
aggcatgcaattgccatcgattatgacccggtcgaaggatatatttattggacagatgat
gaagttaaggctatccgccgtgcatatctggatggatcaggagcccaaacccttgttaca
actgaagtacagcaccctgatggcatagcagttgactgggtagctcgtaatctttactgg
actgacacaggaacagatcgtatagaagttactcggctaaatggcacatcaaggaaaatt
ttaatatctgaaaacctggatgaaccaagagctattgttttacaccccctgaccgggtac
atgtattggacagactggggtgaaaatccaaaaattgagtctgcttatctggatgggtca
gaaaggatggttcttgtaaattcatcattggggtggcccaatggattagcactggacctt
caagatggcaaactttactggggagatgctaagacggataaaattgaggttatcaacgtt
gatggaagcaatcggaaaactctcttggaagacaaacttccacatatatttggctttacg
ttgctgggagattacatctattggacagactggcagagacgaagcattgagagagttcac
aaagtcagagcaagtagagaaattattattgaccaactcccagatctaatgggtctaaaa
gcagcaagtgtctcaaatacatttggtaccaatccctgcgctgacaataatggaggctgc
agccacttatgcttcttttctccccggggagtacgatgttcctgccccataggactggag
ttacttagcgacatgaggacttgcattattcctgaagctttcttggtttttaccagcaga
gcaactatccataggatttccttggaaacaaacaacaatgatgtggccattcctctcaca
ggagtcaaagaggcatctgctcttgattttgacgtatctgataacagattgtactggact
gatatcaccttgaagacaataagtagggcatttatgaatggaagctccgtagaacatgtt
attgagtttggcctggattacccagaaggtatggcagttgattggatgggcaaaaacctt
tattggtcagatactggaactaatcgtattgaagtttcacgtctggatggtctgtatcgt
caggttttggtctggaaagatttagataaccctagatccctggctttggatccagcaaaa
ggctacatgtactggacagaatggggaggaaaaccaagaatagtaagagcctacatggat
gggaccaacagcatcattttggttgataaagtgggtcgagccaatgacttaaccattgac
tacgccgatcaaagactgtattggactgacctggatacaaacatgattgaatcttcaaac
atgctaggagcggaacgagtgattattgcagatgaccttcctcatccctttggactaacg
caatacagcgactatatctattggacagactggaatctccacagcatagaaagagcagac
aagttaaatggcaacaaccgcactttgatacaagatcacttagattttgtgatggatatc
ttggtctttcactcttccaggcaggatggtttaaatgactgcatgcagaataatgggcac
tgcagtcagctctgcttggctgtgccaaagggatacaagtgtagctgctcctctcactat
acacttgactcaaacaacaggaattgcagcccaccctccaactttctattattcagtcag
aaaactgccattaatcgaatgctattagatgagcagcaaagtccagatataactcttcca
atccatgggctgagaaatgtcaaagcggttagttatgaccctctggataaacttatctat
tgggtggacggaaggcagaacatcatcaaaagagcaaaggatgatgggacacagccgttt
gtggtggtctctactccaaatcaaagtcaaactccagaaaaacaacctcatgacttgagt
attgacatatacagccacactttgtactggacttgtgaaggcacaaacaccatcaatgcc
aataagcttaatggagagtctattggagttgtccttcgaggagaccatgacaagcctaga
gccatagctgtgaatgcagagcgagggtacttgtattttactaacatgcaagagcggtcc
ccaaagatcgagagggcagccttcgatgggacggagcgagaagtgctgttttctacaggt
ctcatacggccagttgctttagttgttgacaacaaactgggcaaacttttctgggttgat
gccgacttgaaaagaattgaaagcagtgatctatctggagccaatcgtgtaacgttagag
gactccaatatccttcagccgatggggcttaccattcttggggatcacctgtactggatc
gataagcagcagcagatgattgagagggtggagaaaacaaatggcatcagaagaacgaag
attcaaggtcgcattgctcaccccactggtattcatgccgtggagagtgtcgacatgaat
gagttctctgctcacccgtgttctcgtaacaatggaggctgctctcacatctgcattacc
aaaggagatggtacccctagatgttcttgtcctgtccatctggtcttacttcagaacctt
ctaacatgtggagagccgcccacttgctccccagagcagttcacatgtgcaacaggggac
attgactgcattcctatggcctggcgttgtgatggcttttcagagtgcgatgacaatagt
gatgaagaaaactgccccgtttgttcaagcaaccaattccaatgtgagaagggacagtgc
attgatgcccgtcagaaatgcaatggggagattgattgccaggataagtcagatgaattg
gactgtgactctatctgtcttcctgatcagttccgctgtgccaatggtcagtgtataatg
atgagtcagcagtgcgacaccttccccgactgcagcgatagctccgatgagcttatttgt
gacaagcccccttcggagaagaccccatctcacagcagtgccattggaccagttattggc
attattctgtctgtctttgtcatgggcggcctgtattttgtgtgccagcgagtggtctgt
cacaggtatacggggccaaatggaccctttcctcacgagtatataagtggaactccacat
gtccctctcaattttataacaacaagaagctctcagcctaacacttatactggcatttcc
tatggcaagccaatgattggctcaatgagcatcatgggaggcagtagcggagcgccactt
tatgacaggaaccatgtaacgggagcctcctctagcagctcttccagcactaaggccaca
ttgtaccctcagatattgaatccacctccatcaccagcgacagatcgctccttatacaac
acagaagttttttactcctcaaacagtccatctaccactagatcctacagaccttacctt
atacgagggattgctcctccaacgacaccctgcagtactgatgtctgtgacagtgattac
accacaagcagatggaaagctaataaatactatatggatctaaattcggactcggatccc
taccctccaccacccacgccacgtagtcagtatatgtcagctgaggaaagctgcccccct
tcccccaccacagagcggagctacttccacctctaccccccgccgccctctccatgcaca
gactcttcatga
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integrated database retrieval system
