Xenopus tropicalis (tropical clawed frog): 100491900
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Entry
100491900 CDS
T01011
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100491900 (cfap43)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
100491900 (cfap43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
CFAP43_N
Beta-prop_RIG_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100491900
NCBI-ProteinID:
XP_017947698
Xenbase:
XB-GENE-6464245
UniProt:
A0A6I8PSW6
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All DBs
Position
3:45442635..45488899
Genome browser
AA seq
1660 aa
AA seq
DB search
MVENSGCALEVRWVQGINKKKVTFINDHTVCYPCGNFIVFHDTNTRKQSFLQCMTGSIGA
FSVNTYSEVVAFSDQKLHPSIYVYTFPGFVKRVELKEGAQLDYSLIAFSNAAPYLASFSS
VPDHVLTIWNWQEGIPLCSQSESQTTYTTLTFNPMNWHQLCLSSETSLIVWNIEICDNLY
QLKAMPVKLPSEDGTIGVEEENFNSSAPNGVSYYGPVMPKSAVAGLVGEEAEIFIPKEQR
KHSVQPSFHCWNATSDLYVGCERGKILTISAETQKVIVLAQKDQDADPLSGVTLLEGNIK
TMAFHKEGLYIAGKDGVLRSCTIKGSELKLEDCWSVQESIESISFSPNYKMLSIATCKGS
VYLYNHRNPGETYKVFDVYSGDLLAADFLTFGNKYCLSTDISGHVQLWSVEDGRSVSSLS
LNIQATAMACCPSSNYAAVGSSTGHIYFIDAMKIEALRVVQRMRLYCVPVQHIHFDPRGN
FLLTGAADRHIFILDARPSHSFEVLGYIVVCGEILTLSSLSSEDSQQTKAMALICPVNEG
KEEKGGTRLEMFSLPLQMLSSPSEYIDEKGMFKDAMVQKISYDVDQPLFSAVLGYNVSSV
FGFGSYAPMLLKYVIHKEISGDPLTALVTEKVVRGSHLGPGVLCLSPHLKWISVSGRDGI
VYVKDIKNMETVAQVQCHSYHTGGINSLSFSLDGQSIITTGTSDGALVCLQWKSTGSSRL
GAAVEYGKAFTLSLQAAMKEENQMLSRMPEWTADTSSMAVESKEKEYRNLSVDVTEQDTF
PNTSADVTWIYRKLEEAKKKETEKYAAEKEIIKTGIKKLRKTIQAMMRENESLPDIEKLD
QQEFNLDTEEQERLYLESEKEVARVRQEIELENLSKQYLREVIKQECWDSMAVKGRSVMA
FHTGYEVMNYPMKERTPKELEDFARVLNLKKIEAVDLKVRKEIVETQPKIKADDEEEVEE
ESVSKSQDSSSLVGSLSDLYGGDTSYLYSQLILHSREEKINQIILLQDIIHNIKKAFNKD
FDIACRQKEQEVTRVKERNNRIQEIMVELNLQEKLLEPTFTDNEKPERALTVDDSEVKVE
RYLTPEQKAKAEKLAKEEEAKRLAEQEDNAKQRALDDMMGGVLEVKKEDILRMEVPQPGF
IARAEAEWTDEEKKQFKEYEKKCKDLSEEKEKYSKVLEAEMKKLQLSVIETTQSFDDVLA
RLFEKKVKSEMAIYQEELKINNLLFSLLIEEEINTRVAHLAHILDKKRKQKNQTAEIVKS
FKTQVLAFRESYDNLVAEDKLLDRGFKKEFSDITSYQVDQLYKLYKRRPRVQRLRTQTDS
AAPFGERPGSAKANKDSIALLMKAMDELDTPENMPEGVEFPVWERFCLARRSKIEYEQQV
KIKALVLAEMQAFLDKRIEEDEKIRQDTENIMQELNVLRSEKMKFQLDLTVQFLLKQGQV
ELENSDLIPSFEDAILLHRSVIEDLNSTIRGLGEQKIASMVESKDFRKGIFQLEWEHRKI
RMEMEDLEQKSRDISLLHVSKDFQVFLSEQNYDKRISDQIQVLEATLNAQEKQHEKNVKT
YKKSLKDLETNINKKRTANLDLDKDLQELLVSFSERKHIYDVVGVEQSTEKAAKERYVEI
VQRRKLVDLAKIQAQEIIELRTEVDRLRMKTFPALVQMEY
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaactccggttgtgctctggaagttaggtgggtacaaggaattaacaagaag
aaagtcacgttcatcaatgaccacacagtatgctatccatgtgggaactttattgtgttt
catgacacaaacacaaggaagcagtcctttctgcagtgcatgacagggagcataggagca
ttctcagttaacacctacagtgaagtggttgctttctcagaccagaagcttcatcccagt
atttatgtttacacatttcctggatttgtgaaacgagttgaacttaaagagggagcacag
ctggattattctttaattgcttttagcaatgctgcaccttatctggctagtttttcctct
gttcctgaccatgtacttacaatttggaactggcaagaaggtattcctctgtgcagccag
tcagaatctcaaaccacttatactacgttaacctttaatcctatgaactggcaccaactg
tgtttgtccagtgagacatctcttattgtgtggaacattgaaatatgtgacaacctgtac
cagttgaaagcaatgccagtcaaacttcccagtgaggatggtacaattggtgtggaggag
gagaactttaattcttctgcacccaacggtgtgtcctattatgggcctgtaatgccaaaa
tctgcagttgctggattagtgggcgaagaagcagaaatctttattcctaaagaacaaaga
aaacattctgtccagccaagtttccattgctggaatgccacttctgatttgtatgtgggc
tgtgaaaggggaaagattctaacaatcagtgctgagacacagaaagtcattgtactggcc
caaaaagaccaagatgcagatcctttatctggggttactcttctagaaggaaatataaag
acaatggcgtttcacaaggaaggactctatatagctgggaaagatggtgtgttgcgttca
tgtacaataaaaggttcagaattaaaactcgaagactgctggagtgtgcaggaatccatt
gaaagcatcagtttctcccccaattacaaaatgctctcaattgcaacctgtaagggatct
gtatatctctacaaccacagaaatcctggagaaacatataaagtatttgatgtttacagt
ggagacttgcttgctgctgatttcctgacctttggaaacaaatactgcttaagcacagat
atatcaggacatgtgcagttatggtcagtggaggatggaagaagtgtaagctctctcagc
ctaaatatacaggccactgccatggcatgctgcccttcatctaattatgcagctgtaggt
agcagcactggacatatatattttattgatgctatgaaaatagaagctctacgagttgtc
cagagaatgagactttattgtgttcctgtacaacacattcattttgatccaaggggtaat
tttcttctcactggggcagctgacagacacatttttattctggatgccagaccttcccat
tcatttgaggttcttggatacatcgtggtttgcggagagattctcaccttgtcgtcacta
agttctgaagattcacagcaaacaaaagctatggcgcttatctgtcctgtgaatgaaggg
aaagaagagaaaggaggaacacgattggagatgttttctctaccacttcaaatgttatca
agtccatctgaatatattgatgagaaaggaatgtttaaggatgcaatggttcagaagatt
tcttatgatgtagatcagcctctgttttctgcagttctgggttacaatgtcagctccgtg
tttggatttggcagctatgcaccaatgcttttaaaatatgtaatccacaaggaaatatct
ggagatcctttgactgcacttgttacagagaaggtggtacggggtagccatcttgggcct
ggagtactttgcttgtctcctcatctcaagtggatttctgtgtctgggagggatggaatt
gtatatgtaaaagacataaagaatatggaaactgtggcacaagtacaatgtcattcctac
cacacaggcggtatcaattctttatccttttccttggatggtcaaagtatcatcactaca
ggaacgtctgatggagccctggtgtgcctgcaatggaaatcaactggaagtagcagactg
ggtgcagctgttgagtatggaaaggcttttacactttctcttcaagctgcaatgaaggaa
gaaaatcagatgttgagcagaatgccagaatggacagcagataccagttctatggccgtg
gaaagcaaggaaaaagagtacagaaatctaagtgtggatgtaactgagcaggacaccttt
ccaaacacttctgctgatgtcacttggatttacaggaagctggaggaagctaaaaagaaa
gaaacagagaaatatgcagcagaaaaggaaataattaaaaccggcattaaaaaacttcgc
aaaactatacaagcaatgatgcgagagaatgaatcattaccagacatagaaaagctggac
cagcaggagtttaacttggacactgaggagcaggagagactgtatctagagagtgagaag
gaagtggcaagagtgcgacaagagattgagttggaaaatttgtccaaacaatatcttcga
gaagttataaagcaggaatgctgggattccatggctgtaaagggacgttctgttatggct
ttccatacaggatatgaagttatgaattatccaatgaaagaacgaacaccaaaggaactg
gaagattttgctagagtgttaaatctcaagaaaattgaagctgttgatctcaaggttcga
aaggaaattgttgagactcagccaaaaattaaggctgatgacgaagaggaagtggaagag
gaatcagtgtcaaagagtcaagacagctcatctttggttggcagcctgagtgatctttat
ggtggggataccagttacctgtacagtcagctaattcttcattctagagaagagaagatt
aaccagatcattctattgcaagacatcattcacaatatcaagaaagccttcaacaaagac
tttgatatagcatgtcgtcaaaaagagcaagaggtcacacgtgtgaaggaaagaaataat
cgcattcaggagatcatggtcgaacttaacctgcaagagaaactcctggagcctacattt
actgataatgagaagcctgagagagcgctgactgtggatgattcagaggtaaaagtagaa
aggtacctaacacctgaacagaaagcaaaggcagagaagctagcaaaagaggaagaagca
aagcgccttgcggaacaggaagacaatgctaagcagcgagccctggatgacatgatgggt
ggtgtcctagaagtaaagaaggaagatattcttcgaatggaagttccacaaccaggtttt
atagctcgagctgaggctgaatggactgacgaagaaaagaagcaattcaaagagtacgag
aaaaaatgtaaggacctcagtgaagaaaaggagaaatacagtaaggttttggaagcagaa
atgaaaaaacttcaattgtctgtaattgaaaccacccagagttttgatgatgtgttggcc
agactgtttgaaaaaaaagtgaaatcagaaatggcaatttaccaggaggaactgaaaatc
aataatctccttttctcacttctcattgaagaggaaataaacacaagagtggcacaccta
gctcatattctggataagaagcgcaaacaaaagaatcaaacagcggaaattgtcaagtct
tttaaaacacaagtacttgcatttagggagtcctatgacaatctggtagcagaggataag
cttttagatcgtggctttaagaaggagttttctgacattacatcttaccaagttgatcaa
ctttataagctttacaaacgaagaccaagggttcagcgcttgaggactcagactgacagt
gcagcaccatttggagaacgaccaggatcagctaaggcaaataaggattccattgctttg
ctaatgaaagctatggatgaacttgacaccccagaaaatatgcctgaaggagtagaattt
ccagtgtgggagcgtttctgtcttgcaagacgatcaaagatagaatatgaacagcaggtg
aagatcaaggcccttgtcttagcagaaatgcaggcattcctagataagaggatagaagaa
gatgagaagatacgtcaggatactgagaatatcatgcaggaactcaatgtgttgcggagt
gaaaaaatgaaatttcagctcgatttgactgtccagttccttcttaaacaaggtcaagtt
gagttggaaaattcagatttaattcccagttttgaagacgccattcttcttcataggagt
gttattgaagatttaaacagcaccatacggggtttgggagaacagaaaattgcaagcatg
gttgaaagcaaagatttccgaaaagggatttttcagctggaatgggaacataggaaaata
cggatggaaatggaagatttggaacagaaatctagggatattagcttgcttcacgtctca
aaagatttccaagtattccttagtgagcagaattatgacaagcgcatatctgatcagata
caggtcctagaagcaactctcaatgctcaagaaaaacaacatgagaaaaatgtcaagacc
tacaaaaaaagtctgaaggacctagaaacaaatataaataaaaagagaacagcaaaccta
gaccttgacaaagatctgcaggaattgctggtgtctttttctgaaagaaagcacatttat
gatgtagttggtgtagaacaaagcacagagaaggctgcgaaggaaagatatgtggagatt
gttcagcgacgcaaactagtggatcttgctaagattcaagcccaagagatcattgagcta
agaactgaagtagatagactgaggatgaaaacatttcctgcattagtgcaaatggaatat
tag
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integrated database retrieval system
