Xenopus tropicalis (tropical clawed frog): 100491938
Help
Entry
100491938 CDS
T01011
Symbol
fmod
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100491938 (fmod)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
100491938 (fmod)
Proteoglycans [BR:
xtr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
100491938 (fmod)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_6
LRR_5
LRRNT
LRR_9
LRR_LRWD1
LRR_14
LRR_Zer-1
LRR_EndoS
LRR_R13L1-DRL21
Death_TNFRSF11B
Motif
Other DBs
NCBI-GeneID:
100491938
NCBI-ProteinID:
XP_017947022
Xenbase:
XB-GENE-982650
UniProt:
F6RIJ3
LinkDB
All DBs
Position
2:70536833..70545591
Genome browser
AA seq
357 aa
AA seq
DB search
MKLLLFLLFISVCNVSWCQYDEYDSHWWIAYLHSQQYSYGPSYDYEPVPALPTASDCPQE
CECPPNYPTAMYCDGRDLKYMPYVPARIKYAYFQNNHISAIPDGAFDNATGLVWLALHGN
QIVSDKVGRKIFSKLRGLERIYLQHNNLTRIPTGLPRSLHEIHLSSNQISRFPSNSFEGL
ENLTALYLHENQIQEVGNALKGLKSLVHLDISNNQLRKLPDSLPGSLEQMYMEYNQLSNV
PNEYFKSYPRLQYVRISHNRLTNDGIQGNTFNTSSLVELDLSFNQLNRIPPVNTNLQHLY
LQGNKIEEFSVKSFCTFVDITSFSQLQVLRLEGNEIKANAIPPDTPLCLRKADIIHM
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttgttgtttcttctattcatctctgtgtgtaatgtttcctggtgccagtat
gatgaatatgattctcattggtggattgcctatttgcacagtcagcaatacagctatgga
ccctcctatgactatgagcccgtcccagcacttccaactgccagtgactgcccccaggag
tgtgagtgcccccctaactatccaacagccatgtactgtgatgggcgtgatctcaagtac
atgccctatgtcccagctagaatcaaatatgcatacttccaaaacaaccatataagtgca
attccagacggagcctttgataatgccactgggttggtatggttagcactgcatgggaac
cagattgtaagtgacaaagtaggcagaaagatattctccaaacttcgagggttagagagg
atatatctgcaacataacaatctgacccgcattcccactggcctgcctcgctcactgcat
gagatacacctttcttccaatcagatctctcgatttccatcaaattcttttgagggtctt
gagaacctcactgcactttatctacatgaaaatcaaattcaagaggtagggaatgctcta
aaagggttgaagtccctggtgcacttggacattagcaacaatcaacttcgcaagctacct
gactcattaccaggctctctggaacagatgtatatggagtacaatcaactcagtaatgtt
cctaatgagtattttaagtcctatccaaggcttcagtatgtaaggatatcacataatcgt
cttaccaatgacgggatccaaggaaatacattcaacactagcagccttgtagagctagat
ctatctttcaaccagctaaatcgtattccacctgtgaacactaatctgcaacatctatac
ctgcagggaaataaaattgaagagttttcagttaaaagtttttgtacatttgtggacatc
accagcttctctcagcttcaagttttacgtcttgaaggtaatgaaattaaggctaatgct
attccaccggacacaccactctgccttcgtaaagctgacatcatccatatgtag
DBGET
integrated database retrieval system
