Xenopus tropicalis (tropical clawed frog): 100491996
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Entry
100491996 CDS
T01011
Symbol
dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X2
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100491996 (dscaml1)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Other
100491996 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Ig_C17orf99
V-set_CD47
Receptor_2B4
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
100491996
NCBI-ProteinID:
XP_002932951
Xenbase:
XB-GENE-922538
UniProt:
A0A8J0QMI3
LinkDB
All DBs
Position
7:81714790..81856335
Genome browser
AA seq
2042 aa
AA seq
DB search
MLLVTLSLLCSVHLAHLEDAGTSLYFVNTSLLQITFSSTVGVFIPCPAAGSPSATLRWYL
GTGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRAMRGSAAVFKCLTPPSVQEYVSVVSWEKDTVSLTSEGRFVTSPSGA
LYILDVQKEDALSTYRCITRHRYSGETRQSNGARLLVSDPAESVPVLLDGFQSQEALVGE
TVELPCIASGYPNLASRWIKDGRPVPSDSRWSKRSTGLSMADLRLEDSGTYICEITNSFG
SAEVTGTLTVIEPLRVTLSPKKLKTGIGSTVILSCSLSGSPGYIVRWYRNTEHIEADEFI
SIRGADNETLVISSAQKSHSGAYQCFGTRKKQTAQDFAIVVLEDGTPRILSSFSEKVMNP
GEQFSLMCSAKGAPPPTITWTLDDEPIQRDSGHRSNQYTTADGSTVSYMNVSSPQILDGG
VYRCAARNSVGSAEYQARINVRGPPSIRPMKNLTAVAGRDSFIHCRVIGYPYYFISWYKD
SLLLPDNHRQVVFENGTLMLSDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIVSGSGITIETKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
VWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKGLNCTARGERPIIIRWEKGDTVIDPDRNLRYLIAT
KDSGDEVISTLTLKPAERGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEVREVKAR
SMNLRWTQRFDGNSIITAFDIEYKNKSDSWEFKQSTRNISPIINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPLTSQSIQVTWKAPRKELQNGVIRG
YQIGYRENGPGSNGQYSIVEMKATGDAEVYTLDNMKKFAQYGVVVQAFNRAGTGPSSTEI
NATTLEDVPSKPPENVRVLSITSDVAVISWSEPPRNSLNGVLKGYRVIFWSLYPDGEWGE
MQNITTPRERVELKSLEKFTDYSVQVLAYTQAGDGVRSDVLYLQTKEDIPGPPAGIKAVS
SSSSSVVVSWLPPTKPNGIIRKYTIFCSSPGSGQPAPSEYETSPEFLHYRIMHLLRGQQY
MLWVAAVTSAGRGNFSEKVMIEPAGKAPAKIISFGGTVSTPWMKDVRLPCSSVGEPAPAI
KWTKDSEDSAIPVALDGHRLIHSNGTLTLRSVKAEDSGYYTCTATNTWGFDTIIVNLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWRDVFISSSERSFR
LENLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFNKDQPLFTHVNSTHARLNLH
GWNSGGCPITSVILEYRPQNTWPWQSLRANVTSDVFLTELREATWYELKMRACNSAGCGN
ETSRFATLDYDGSTIPPIKSAQGEGDDVKKLFSIASPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPAGPRLHIDIPRVQLLIEDKEGVKQLGDDKAT
LPVTDAEFSQTVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENGDSMTSMSTP
SEPGICRFTASPPKPQDSDPTKNVAVPIPHRAKSEYCNLPLYMKSEPHFRKPDPHDSCPV
VPPREASMRNLNRSYHSRHLTLEPGAKPPPGLSHPTPSGVSLPQRTLLLAGASASAPSAP
AATAPSAPADPTPSVGPVENRLPTQHSKMGGSRDSLLEMSSSGGSRAQKQGAGAYSKSYT
LV
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtaactctctccctgctgtgttctgtgcatttagctcatttggaggatgct
ggcacaagtttatattttgtgaacacttctttgctgcagatcacattctcaagcactgtg
ggggtgttcatcccctgcccggctgccggatcccctagtgcaacccttcgatggtacctt
gggacaggagatgacatttatgatgtgccacacattaggcatgtacatgccaatggcaca
cttcagctgtaccctttctccccgtccgctttcaatagctttatacatgacaatgactat
ttctgcacagccgagaactccgcaggcaagattcggagtccgaacattcgtgtcaaagca
gttttcagggaaccatataccgttcgagtggaggatcagcgcgccatgcggggaagcgca
gctgtctttaagtgcctcacccctccctctgtgcaggaatatgttagtgtggtgtcctgg
gaaaaggatactgtgtctctcacatcagagggtaggtttgttacctccccttcaggtgct
ctgtatatcttggatgtacagaaggaagatgccctgtccacatatcgctgcatcacaagg
catcgctacagcggggagacacgacagagcaatggtgcacggcttcttgtttcagatcct
gccgagtctgtccctgtgctgcttgatgggtttcagtcacaagaagctcttgtgggggaa
accgtggaactgccttgcattgcatcaggatatcctaacctagctagccgctggattaaa
gatggccgcccagtgccatctgacagtcgatggagcaaacgcagcactggtttgagtatg
gctgatctgagactcgaggatagtggcacctacatttgtgaaattacaaacagctttggc
tctgcagaagtcactggtacattgactgtcatagagcctctccgtgtgactctttctcct
aaaaagctaaaaactggaattggtagcacagtcattttatcttgctctctcagtggatct
ccaggttacattgtgcgctggtaccggaacacagagcacattgaggcagatgaatttatc
tccatccgtggggcagataatgaaacactagtgataagcagtgctcagaagagccactca
ggggcataccagtgctttggaacccgcaagaaacaaactgcacaggactttgctattgta
gttttagaggatggtacacctcgcatcctctcctccttcagtgagaaagtaatgaaccca
ggggagcaattttcactaatgtgctcagccaagggagctccaccacccaccataacctgg
accctggatgatgaacccatccaacgggactctggacaccgctctaatcagtataccact
gctgatggtagcacagtcagttacatgaatgtgagcagcccacagatcctggatgggggg
gtgtacagatgtgccgctcgcaactctgtggggagtgcagagtatcaagctcgaataaac
gtaagaggacctccgagtatccgacccatgaagaatctgacagcagtggcaggaagagac
agcttcattcactgccgagtcatcggttatccctactatttcatcagttggtacaaggat
tctcttttgttgcccgataaccacagacaagtggtatttgagaatgggactctgatgctg
agcgatgttcagaaagggatggatgaaggagaatatctatgcagtgtactcatacaacct
cagctctcaatcagccaaagtgtccatgttactgtcaaagtgcccccactgatccagcct
tttgagtttcctcctgcttccatcggacaactgctttacattccttgtgtggtgtcttcg
ggggatatgcctattcgtattacttggcgtaaagatggacaggtgattgtttccggatct
ggaattactattgaaaccaaggagtttatgagctccctgcagatttccagcgtgtcactc
aagcacaatgggaattacacttgtatagcaagtaatgatgcagccactgtgagccgggag
agacagcttattgtaagagtgccacccagatttgtggttcagccaaacaatcaggatgga
atctatggcaaagctggagtactgaattgctcagtggatggataccctcctccaaaagtt
gtgtggaagcatgctaagggaagtgggaacccccaacaataccaccctgtgccactaact
ggccgcatccagattcttcctaacagctcccttcttatccgtcatgtgctagaggaggat
attggttattacctttgccaggcaagcaatggagtgggcactgacatcagcaagtctatg
ttccttaccgtgaagataccagcaatgatcacttctcacccaaatacaactattgccatc
aaaggtcaaacgaaaggccttaactgcacagcacgaggagaacgccccattataatccgc
tgggaaaaaggagatacagtgatagacccagacaggaatttacgctacctaattgctacc
aaggacagcggggatgaggttatctccactctgacgcttaagccagcagaaagaggggac
tctgtgtttttttcgtgccatgcaataaactcatatggagaagacagaggcctgatacaa
cttactgtgcaagagcctcctgatccccctgagctggaggtccgggaagtgaaggctcgt
agcatgaatctacgctggactcagagatttgatggaaacagcattataacagcttttgat
attgagtataagaataaatcagattcctgggaatttaagcagtccactcgtaatatatca
cccatcatcaaccaagccaacatagttgatttgcatccagcgtcagtgtacagcatacgc
atgtattcatttaacaagattggccgtagtgagcccagcaaagagcttacaatcagcaca
gaagaggcagctcctgatggtccacccatggatgtcaccttacagccattgacatcacaa
agtatacaagtaacctggaaggcccccaggaaagaactacagaatggtgtaattcggggt
taccaaattggttatcgggagaatgggcctggcagtaatggccagtatagtattgtggag
atgaaggccaccggggatgcagaggtatacacattggacaacatgaagaagtttgcacag
tatggagttgttgttcaggcgttcaatcgagccggaactggtccatcctcaactgaaatt
aatgctaccactctggaagatgttccaagtaagcccccagagaatgtccgagttctgtca
atcacttctgatgtggcagtcatctcctggtctgagcctcctcgcaactctctcaatggt
gtattgaaaggatacagagtcatattctggtctctatatccagatggggaatggggggag
atgcagaatataaccactcctcgagagcgagtagagcttaagtcgcttgagaaatttacc
gattacagtgtgcaagtgttggcttacacccaagcaggtgatggtgtgagaagtgatgtt
ctttacctgcagaccaaggaagacattcctggacctccggctggtattaaagctgtgtct
tcctcatccagtagtgtagtagtgtcctggttgcccccaactaaacctaatggcataatc
cgaaaatacactattttctgctccagcccaggatcaggacagcctgcacctagtgaatat
gagacaagccctgagttcctgcattaccgtatcatgcacctcctccggggacagcagtac
atgctgtgggttgcagcagtgacatcagctggacgtgggaattttagcgaaaaggtcatg
attgagccagctggaaaagctccagccaagattatttcatttggtggcacagtaagcacc
ccctggatgaaggatgtccgcttgccttgcagctcagtgggggagccagcacctgctatt
aaatggaccaaagacagtgaagactctgcaataccagtagctctagatgggcatcgactg
attcactccaatgggacacttaccttgcgttctgttaaagctgaagattctggttactac
acttgtactgccaccaatacatggggatttgacaccataattgttaacctactagtccaa
gttccacctgatcagcctcgcctcacagtctctaaaacttcagcatcctctatcactctg
gcctggattcctggcgataatggaggaagttcaatccgaggttttgtccttcagtactct
gtagataacagtgaggaatggagagatgtatttatcagctcatctgagcggtccttccgc
ttggagaatttgcgctgtggaacatggtacaaagtcaaattggctgcaaagaacagtgtt
ggggccggaagaataagtgaaataattgaggccaagactcatggcagagagccatcattt
aataaagatcagcccctcttcacccatgttaactctactcatgcacgcctaaatctccat
ggctggaatagtggtggttgtccaatcacctctgtgatcctagaataccgcccacagaac
acttggccatggcagagccttcgtgccaatgtaacaagtgatgttttcttgactgaactt
cgtgaagccacctggtatgagctgaagatgcgggcttgtaatagtgcaggctgtgggaat
gaaacctcaaggtttgccactctggactatgatggaagtaccattccacccattaagtct
gcccaaggtgagggagacgatgtgaagaagctcttctccattgcctccccagtgatcctg
gccaccctgggggttgctcttttattcattatacgcaagaagagaaaagagaagaggcta
aagaggcttcgagatgctaaaagtctggctgagatgcttatcagcaaaaacaatcgtagt
tttgacactccagtaaagggaccccctgctggtccacggcttcatattgacattcccaga
gtacagcttctaattgaggataaggagggcgtcaaacagcttggggatgataaagctacc
ttgccagtgacagatgctgagtttagccagacggtaaatcctcagagtttttgcacaggg
gtttccctacatcaccctgcactgatccagaacacagggcctctaattgacatgtctgac
atacgtcctggaacaaatccagtttctcgaaagagtgtgaagtctgctcacagcactaga
aacaggtattccagtcagtggactctaacaaagtgccagagctccacccctgcacgaaca
ctgacttctgattggaggactgttgggtcacagcatggcatcaccgttacagagagtgac
agctacagtgctagtctttctcaggatacagacaaaggccggaatagtatggtctctaca
gagagtgcatcctcaacatatgaggagcttgctcgagcatatgaacacgccaagttagaa
gagcagctacaacatgcaaagtttgaaattacagaatgtttcatttcggacagttcttct
gatcaaatgacaacagggaccaatgagaatggagacagcatgacatctatgagcacgcct
tcagaaccaggcatttgtcgctttactgcatcacctcccaagccacaggacagtgatcct
accaagaatgtagctgttcctattcctcaccgagctaaaagtgaatattgcaatttgcca
ctctacatgaaatctgagccccactttcgcaagccagaccctcatgattcttgtcctgtg
gtaccaccacgtgaggcctccatgcgcaacctgaatcggagttaccattctcggcacctt
accctagaaccaggggccaagcccccacctggactgtcacaccctaccccttctggtgtc
agtttacctcagcggactctgcttttggctggagcctcagcctctgctccttcagcacca
gcagccacagcaccatcagctccagctgatcccaccccatctgttggacctgtagaaaac
cgcctgcctactcagcacagcaagatgggtggctccagagactctctactggaaatgagc
agttctggaggtagccgggcacagaagcaaggagctggagcttactccaaatcttataca
ctggtctga
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integrated database retrieval system
