Xenopus tropicalis (tropical clawed frog): 100492076
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Entry
100492076 CDS
T01011
Name
(RefSeq) high affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100492076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100492076
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
100492076
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
100492076
NCBI-ProteinID:
XP_002940185
UniProt:
A0A6I8SWJ5
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Position
2:complement(165659800..165682531)
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AA seq
537 aa
AA seq
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MALNVPGLIAVIVFYAMTLVTGLWAAWKAKKSEKNKKQTEVAIVGGRNLNIFVGLFTTTA
TWVGGAYINGTAEIVYLPSRGLAWVHAPLGFAATFIIGALFFVKPMRSKNYVTMMDPLQE
TFGNTMGSILFLPPLLGDVFWFASILASLGATVSVILDVKGYVSIIISACTVIIYTLLGG
LYSVAYTDVIQLLFMIISLWICVPFALLNSASENIAYTAVNALYQAPWIGKIQPGYIARW
LDDLAYLSLGGIAWQTYFQRVLAASSSKQAMVTSYLSGLLCAVMGVPSILIGAVAVSTDW
NQTSYGLPTPYERRESNMILPLVLQYLCPTYVSVAGLGAIAAAVMSSADSSLLSASSMFA
YNIYKRLLRKKASEREVLWVMRLSMVLLGSVGTGLAFLSNSVYDMWFLSGELVYAILFPQ
LCCALFIPGTNTYGSAAGFILGFVLRLLGGESALKIPPFLHYPGCILVDGVFIQQFPFKT
FTMTVSLITIVAISYLAQFLFMKNILPAQWDICYVFRKETPPLSQQELEEELSLQKT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatgtccctggcttaatagccgtcatcgtcttttacgcaatgactttggtc
accggtctctgggctgcctggaaagccaaaaagagcgagaagaacaaaaaacaaacagag
gtggctatcgtggggggtcggaacttgaatatatttgttggactcttcaccacaactgca
acatgggtcggaggtgcctacatcaacgggacggcagaaattgtgtatcttccctcgcga
gggctggcgtgggtccatgctcccttggggtttgccgcaacctttattatcggagctctt
ttctttgtcaagccgatgaggtccaaaaactacgtgaccatgatggatccgctccaggag
acatttggaaacaccatggggagcatccttttcctaccaccactgctgggtgacgtcttc
tggtttgcctccattctcgcttccttgggagccacggtgagtgtgatcctggatgtgaaa
ggatacgtgtccattattatatcagcttgcacggtgataatatacacattgctcgggggt
ttgtattcagtcgcctacacggacgtaattcaacttctctttatgataatcagtctgtgg
atttgtgtaccatttgctcttctaaactcagcatctgaaaacattgcttacacagcagtg
aatgcattgtaccaagctccatggattggtaaaatacagccaggatacattgcaagatgg
ctggatgatttagcatacctgagcctgggaggcattgcatggcagacatattttcagaga
gtccttgccgcttcctcttccaagcaagccatggtcacatcctacctatcagggttgctg
tgtgctgtgatgggtgtcccctctattctgattggtgccgttgctgtctctacagactgg
aaccagactagctatggcttgccaacaccctatgagagaagagagtcgaacatgatatta
cccctggtcctgcagtatctttgtcctacctatgtgtctgttgctgggttaggagccata
gcagcagctgttatgtcctctgctgattcatcacttttgtcggccagctccatgtttgcc
tacaacatatacaaaaggttgctaaggaagaaggcgtctgagagagaagtcctctgggta
atgcgtctctccatggtcctgcttggatcggttgggacgggcctcgcgtttctgtccaac
tctgtgtatgacatgtggtttctcagcggagagctggtgtacgctatcttgttcccacag
ctttgttgtgcccttttcatccctggcaccaacacgtatggttcagcggctggcttcata
ctcggctttgttctgagacttctaggaggagaaagcgccttgaagatccctccttttctc
cattacccaggatgcattcttgtagatggtgtcttcatacagcagtttccattcaaaaca
ttcaccatgactgtgagcttgatcaccattgttgccatatcttatttggcccagtttttg
tttatgaaaaatatattgcccgctcagtgggatatttgctatgtctttcggaaagagaca
cctcctctgtctcaacaggagctggaggaagagcttagtttacaaaagacctga
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