Xenopus tropicalis (tropical clawed frog): 100492144
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Entry
100492144 CDS
T01011
Symbol
phf2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100492144 (phf2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100492144 (phf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_4
PHD_ash2p_like
DUF7693
Motif
Other DBs
NCBI-GeneID:
100492144
NCBI-ProteinID:
XP_031757142
Xenbase:
XB-GENE-6065306
UniProt:
A0A6I8Q5D7
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All DBs
Position
4:complement(152018591..152123787)
Genome browser
AA seq
1070 aa
AA seq
DB search
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTHGKS
TLKKKKNWPKQDTGQATEVKPVQNGSQVFIKELRNRTFPSAEDVVKKLNGNQLTVEYFEE
TGFTEPILVPKKDALGLTVPAATFYVSDVENYVGPERAVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEAPEIVKKLSWVENHWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPESANISLYERWRSASNHCEMFFADQVD
KCYKCAVKQGQTLFIPSGWIYATLTPVDCLAFSGHFLHSLSVEMQMRAYEVEKRLKIISL
TQFPNFETACWYVGRHLLEKFKALHKAGKQPAPHLVQGAKILNGAFRSWTKKNALLEHED
ELPEHFKPSQLIKDLAKEIRLTENASKVIKTEVSANVIAERNNIVEKIEKDEPASPVPES
PPPVEKMEKAPKKKTAKNEKPLKPPKPPKPPKPPKVAKPPKVAKPNKTPKAPKAQKEKDG
GKKKGKKVKESPISLPTTPDLEPHETLMKDTPIAAEAPKKGMVPKEELSVPTKEEAPKHN
HVEKCEMREQNKIKTEAKWKYKNSKPDSLLKMEEEHRLQKTLFSANKDHKFKFSFTNKKL
FGSKGIKTQNSPSIFGSLQNFKEDKTKPVRDEYEYVSDDGELKIDEFPIRRKKTTTKRDL
SFLSDNKETPPPPPSKKPKVQESKYKSDDTSDEDSLHIDTEEKPARNSRVKKDSGSSAGI
LDLLQASKEVGGLDYNSNSQPPASPSTQEAIQGMLSMANLPSDSCLQTSWSANQAKNNSI
SAQNSKKSGNNKLANKRASKKANKNSIALEDYDEDQDNLEACFKDSDYVYPSLESDEDNP
VFKSRAKKRKCSDDAPYSPTARVAPSIPRQDRPVREGTRVASIETGLAAAAAKLSQQEDQ
KPKKKKTSKKKLSPNMPNALCQEGSSSPEVSLSGPTDHEYTAGASTFGVAQVNRGPQPMA
PGVFLTQRRPSASSPNNSAAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgcccgtctactgcgtctgccgcctgccctacgatgtgacccgattcatg
atcgagtgcgacgcctgcaaggactggttccacggcagctgtgtgggagttgacgaagat
gaagcccccgacattgacatttatcattgtccgaactgtgagaaaacccatgggaaatcc
accttgaaaaagaagaaaaattggcccaaacaggacacgggacaggccacggaggtgaaa
ccggtgcagaacgggagccaagtgtttatcaaggagctgcgcaatcggacctttcccagc
gccgaggatgttgttaagaagctgaatgggaaccagttgacagtggaatactttgaggag
acgggtttcacagaaccaatcctggtgccaaagaaggacgcgttgggcctgacggtaccg
gcggcgacgttttatgtcagtgacgtggaaaattatgtcggccccgagcgagcggttgat
gtcacagatgtcaccaaacagaaagactgcaagatgaaactcaaagagtttgttgattac
tattacagcacaaacaggaaaagagtcttaaacgtcaccaacttagagttctccgacacc
agaatgtccagctttgtggaggcgccggagatcgtcaagaagctttcatgggtggagaac
cattggccggacgatgccctgctggccaagccaaaagtgacaaaatactgtctgatatgt
gtcaaagacagctacacggacttccacatagactcggggggtgcctccgcctggtaccat
gtgctgaaaggggagaagatattttatctcatccgacccgagtcggccaatatctcactg
tacgagcgctggcggtcggcttccaaccactgtgaaatgttcttcgctgaccaggtggat
aaatgctacaagtgtgcagtgaaacaggggcaaacgctttttattccttcaggttggatt
tatgcaactctcacccctgtagactgtttggcattttcggggcatttcttgcacagcctg
agtgttgagatgcagatgagggcatatgaagtggaaaaacgtctaaaaatcatcagcttg
acccaattcccgaattttgagacagcctgttggtacgttggaaggcacctcctagagaag
ttcaaagctttgcacaaagccgggaagcagccggcaccgcaccttgtccaaggggccaaa
attctgaatggagccttcagatcctggacgaaaaaaaacgctctgctcgaacacgaagac
gaactgccggaacattttaagccatcgcaactgatcaaggatctcgccaaagaaatccga
ctgacggagaacgcttccaaggtcatcaaaacggaagtgagtgccaacgttattgcagaa
aggaacaatatagtggagaagatagaaaaggatgaacctgcgtctccagttccagaatcc
cctcctcctgtggaaaaaatggaaaaagctcccaaaaaaaagactgcgaaaaacgagaaa
ccgctcaagccgccaaagcctccgaaaccgccgaaaccgcccaaagtggcgaaaccccca
aaggttgccaaacccaacaagacgcccaaggcaccaaaggctcagaaggaaaaggacggg
ggaaagaagaaagggaagaaggtgaaagaaagccccatctcgctccccaccaccccagac
ctagagcctcatgagaccctcatgaaggacactccaattgcagcagaagcaccaaagaaa
gggatggtacctaaagaagagctcagcgtccccaccaaggaggaagcccccaagcacaac
catgtggagaaatgcgaaatgcgggagcagaacaagatcaagactgaggccaagtggaaa
tacaagaacagcaagccggattcattactgaaaatggaggaggagcatcgattgcaaaag
acattattttcagcaaataaagaccataaattcaagttctctttcaccaataagaaattg
tttgggtccaaaggtatcaagacccagaatagtcccagcatttttggatctctgcagaac
tttaaagaagacaaaaccaaaccggtcagagacgaatacgaatatgtatcggacgacgga
gagttgaagatcgacgagttccccatcagaaggaagaaaacgaccacaaagagagatctg
tcctttttgtcagataacaaggagactcctcctccgcctccatcaaagaaacccaaggtc
caagaatcaaagtacaagagtgacgacacttccgatgaagactcccttcacatagacaca
gaggaaaaaccagcacgaaactccagagtcaaaaaggacagtgggagctcagccgggata
ctggatctgctgcaggcgagcaaggaagtcgggggtttggattataactcaaacagccaa
ccgccagcatccccgagcacgcaggaagcaatccagggaatgttatcgatggccaatctg
ccctcggattcctgcctacagacctcttggagtgcaaaccaagccaagaataattccata
tcagcacagaattccaaaaaatcaggcaacaacaaacttgcaaacaaacgagccagcaaa
aaagccaacaagaacagcattgcgctggaagactacgacgaggatcaggataacttggag
gcgtgttttaaagattctgattacgtttacccatctctagaatcagatgaagataatcca
gtgttcaaatctcgagcaaagaagcgaaagtgttctgacgatgccccttatagccccaca
gcgagagtcgctccttcgataccccgacaagacagacctgtccgggaaggtacgagagtg
gcatctattgaaacaggcctggcagccgcggcggcaaagctgtctcagcaggaggatcaa
aagcccaagaagaaaaagacttccaaaaagaagctctcacccaacatgccaaatgcgctt
tgtcaggaaggcagctcctctcccgaggtctcactgagtggccccactgaccatgagtac
acggccggtgcaagcacgtttggtgtggcccaagtaaacagaggccctcagcccatggcc
cccggggtcttcctcacacaaaggagaccgtcagcgtcttctccgaataactcagctgcc
aaaggtaaacgtacaaaaaaaggcatggccacagcaaaacagaggcttgggaagattctg
aaaatccatcggaacggcaaactcctcctttag
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