Xenopus tropicalis (tropical clawed frog): 100492212
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Entry
100492212 CDS
T01011
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100492212 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100492212 (nhlrc1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100492212 (nhlrc1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100492212 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4
Baculo_IE-1
zf-C3HC4_2
Phytochelatin
HNHc_6
SdiA-regulated
Methyltransf_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100492212
NCBI-ProteinID:
XP_002932735
Xenbase:
XB-GENE-1010800
UniProt:
F6VLT2
LinkDB
All DBs
Position
6:92717804..92719659
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AA seq
398 aa
AA seq
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MSSPASKEIRNMKDFLEETELNLLECKVCFEKYSQQQKHRPKNLPCGHVICQECVLALCP
QGSSRLECPFCRKACRTLETSICLPVLHLMEMVTRVLPDQLESPSAQNTSHVTKLRPASF
NLSLSFGGWGILFNPTGIALCRKTGCLVVAHDGKKRIGVFSMTGKCIQQIGVKSDSPNAI
VYPLDVAVTQDTCIAVTDAGDHSLKVFDWSGKLTLTVKQNFLLPWGLCINLQNEVIVSDS
DAGTLVLVVADFKQGIVKKMLKLYSNLTQPREIAVCPTSGAVVVVEHLAKDRKNSSSTRV
KIFSSAMKLIRQIDSFGLSLFLPLAVHTSGVAFDHEGNVLVADVNNRCVICLDKTDECRF
LKHVVASGLSYPVALTTLEDGSVAVLDSGNHSVLVYSP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccccggcttctaaggaaatcagaaacatgaaagattttttggaagaaacagaa
ttgaatttacttgaatgcaaggtttgttttgaaaagtacagccagcagcagaaacacagg
cctaaaaaccttccatgtggccatgtgatttgccaggaatgtgttttagctctctgccct
caaggaagctcaagattagaatgcccattctgtcgtaaagcctgcagaactttggagaca
agtatctgcctacctgtcctgcacttaatggaaatggtaactcgggtacttcctgatcag
ctggaatctccatcagcacaaaatacaagtcatgtaaccaagctgaggcctgctagtttt
aatctcagtctatcatttggtggctggggcatcttgttcaacccaactggcatagcactg
tgcaggaagactggttgtctagttgtagcccatgatggcaaaaaaagaattggagtgttc
tctatgacgggaaaatgcattcaacagattggtgtcaaatcagactcccctaacgcaatt
gtttatccattggatgtcgctgtcacgcaagacacctgtatagctgtgacagatgctggt
gatcattcactgaaggtgtttgattggtcagggaagcttacgctaactgtcaaacagaac
tttttgctgccatggggcttgtgcatcaaccttcaaaatgaagttatagtttccgactct
gatgccggtactcttgttcttgttgttgcagactttaaacaaggtatagttaagaaaatg
ctcaagctctattccaacttaacccagccaagagaaattgcggtgtgcccgaccagcgga
gctgtggttgtggttgaacatctggcaaaagaccgcaagaattccagcagcacccgagta
aagattttcagcagtgctatgaaactcatacggcaaattgatagttttggcttgagtttg
tttctccctttagcggtgcacaccagcggagtcgcatttgatcacgagggcaatgtcttg
gttgctgatgtaaataacagatgtgtcatttgtttggataaaacagacgaatgccggttt
ctaaaacatgttgttgctagcggactttcttatccagtggcgctgacaacgctagaggat
ggctccgttgctgtgctagacagtggaaaccattctgtgttagtctatagcccttaa
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integrated database retrieval system
