Xenopus tropicalis (tropical clawed frog): 100492279
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Entry
100492279 CDS
T01011
Symbol
lrrc8a
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100492279 (lrrc8a)
Ion channels [BR:
xtr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
100492279 (lrrc8a)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_R13L1-DRL21
LRR_5
LRR_1
LRR_9
LRR_EndoS
LRR_LRWD1
zf-RING_16
Sp-CxC
BPD_transp_2
Motif
Other DBs
NCBI-GeneID:
100492279
NCBI-ProteinID:
XP_002935552
Xenbase:
XB-GENE-1012024
UniProt:
F6WY49
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Position
8:complement(22873419..22883583)
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AA seq
809 aa
AA seq
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MIPVTELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
THDSCNDSYRAWNVPETDLYTNSTLSPPLAPGPTGIKYDLDRHQYNYVDAVCYENRLHWF
AKYFPYLVLLHTLIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEES
DPKPTGGKMNGSVDKKSSTASEDVEATVPMLQRSKSRVEQGIVDRSETGVLDKKEGEQAK
ALFEKVKKFRTHVEEGDIVYRLYMRQTIIKVIKFIIILCYTVYYVSSIKFDVDCKVDIES
LTGYRMYRCAHPLATLFKILASFYISLVGFYGLVCVYTLWWMLRRSLKKYSFESIREESS
YSDIPDVKNDFAFMLHLIDQYDPLYSKRFAVFLSEVSENKLRQLNLNHEWTLDKLRQRIT
KNSQEKLELHLFMLSGIPDTVFDLVELEVLKLELIPDVTIPPSIAQLTGLKELWLYHTAA
KIEAPALAFLRENLKSLHIKFTDIKEIPLWIYSLKNLEELHLTGNLSAENNRYIVIDGLR
ELKRLKVLRLKSNLTKLPQVVTDVGVHLQKLSVNNEGTKLMVLNSLKKMVNLTELELVRC
DLERIPHSIFSLHNLQEIDLKDNNLKTIEEIISFQHLHRLTCLKLWYNHIAYIPIQIGNL
ASLERLYLNRNKIEKIPTQLFLCRKLRHLDLSHNSLSSIPPEIGHLQSLQYLAVTANHIE
NLPAELFLCKKLRTLNLGNNVLQSLPSRVGELTNLSQVELRGNRLEYLPVELGDCHLLKR
SGLVVEEDLFNTLPLDVKEKLSRSEKEQV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtaacagagttgcggtactttgctgacacccagccggcttaccgtatcctc
aaaccatggtgggacgtcttcacggactacatctccatcgtcatgcttatgatagcagtg
ttcgggggcaccctgcaggtcacgcaggacaagatgatctgtcttccgtgcaagtgggtc
actcatgactcctgcaatgattcctaccgggcctggaatgtgccagagacagatctctat
acaaattctaccctgtcacctccacttgcaccaggacccacaggtattaaatatgacctg
gataggcatcagtacaactatgtggatgcagtgtgctacgagaaccgcttgcactggttt
gccaagtactttccctaccttgtcctgctgcacacgttgatcttcctggcctgcagcaac
ttctggttcaagttcccccgtacaagctcaaaacttgagcatttcgtctccatcttgctt
aaatgctttgattctccctggaccacccgggccctctcagagacagtcgttgaagagagt
gacccaaagcccaccggaggaaagatgaatggctcagtagacaaaaagtcctccactgca
agcgaagatgtggaagcaacagtgcctatgctccagaggagcaagtcaagggtcgagcag
gggattgtggacaggtcagagacgggtgtgctggacaaaaaggaaggagagcaagccaaa
gcactgtttgaaaaggtgaaaaagttcaggactcacgtggaggaaggggatattgtgtac
cggctgtacatgcgtcagactatcatcaaagtcattaagttcatcattattttgtgctac
actgtgtactacgttagcagcattaaattcgacgtggactgcaaggtggacatagagagc
ctgactgggtaccggatgtaccgatgtgcccacccgctggctactctcttcaagatcctg
gcatctttctacatcagcctggtgggtttctacggcctagtctgtgtttacactctctgg
tggatgctgagacgttctttaaagaagtattcctttgagtccatcagggaggagagcagc
tacagcgacatccccgatgtcaagaacgactttgctttcatgctgcacctcatagaccag
tacgatcctctctactccaagcgttttgctgtgttcttgtcggaggtcagcgagaacaaa
cttcgccagcttaatctcaatcacgagtggaccctcgacaaactgcggcagaggatcaca
aagaattctcaggagaaactggagctgcatcttttcatgctcagcgggatacctgacacg
gtcttcgacttggtagagctggaagtgctaaaactcgagttaataccagatgtcactatc
cctccaagtattgcccagctcactggcctgaaagagctatggctgtaccacacagcagct
aaaattgaagctccggctcttgccttcctgcgggagaaccttaagtcactacacatcaag
ttcacggacatcaaggagatccccttgtggatatacagccttaagaacctggaggaactc
cacctgactggcaacttgagcgcagaaaacaaccggtacattgttatcgatggcctccgg
gagctgaagaggctcaaagttctgagattgaagagcaaccttactaagctgcctcaggtg
gtgacagacgtcggggtccacttgcagaagctgtccgtcaacaatgagggaacaaagctg
atggttctcaacagtcttaaaaagatggtcaacctgactgaactggagctggtgcgctgt
gacttagagagaattcctcactctatcttcagccttcacaacctgcaagagattgacttg
aaggacaacaatttaaagaccattgaagagatcataagcttccagcacctgcaccggctc
acatgcctgaagttatggtacaatcacatagcctatatacccattcagatcggcaatctg
gctagccttgaacggctctacctgaaccgcaacaagatagagaaaatccccacccagctc
ttcctgtgccgcaagcttcggcatctagacctgagccacaattccctcagcagcatcccg
ccagaaattggccacctgcagagcctgcagtaccttgctgtaaccgccaaccatattgaa
aacctgccggccgagctgttcctgtgcaagaagctccgtacgctcaacttgggtaacaac
gttttgcagtctctgccttcccgagtgggtgagctcaccaacctatcccaggtggagctt
cggggtaaccgcttagagtacctgccggtggagctgggtgactgtcaccttctgaagcgc
agcggccttgtagtagaagaagacttgttcaacactcttcccctggacgttaaagagaag
cttagccggtcagaaaaggagcaggtgtga
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