Xenopus tropicalis (tropical clawed frog): 100492308
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Entry
100492308 CDS
T01011
Symbol
aars1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic isoform X2
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100492308 (aars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
100492308 (aars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100492308 (aars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
100492308 (aars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100492308 (aars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100492308 (aars1)
Prokaryotic type
100492308 (aars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Med11
Fzo_mitofusin
Rop-like
Death_3
GRDA
Lipase_GDSL_3
Motif
Other DBs
NCBI-GeneID:
100492308
NCBI-ProteinID:
XP_002931707
Xenbase:
XB-GENE-963523
UniProt:
A0A6I8RC67
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All DBs
Position
4:complement(74896841..74927783)
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AA seq
968 aa
AA seq
DB search
MKTCMTASEIRQKFIDFFKENAHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKLNRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALD
LLTKEFGIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLPESRILPGSMKDNFWEMGD
TGPCGPCSEIHFDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIEKGTGARPYTGKVGAEDVDGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASKGFFATLVDVVVQSLGNA
FPELKKDPDMVKDIINEEETQFLKTLNRGRRILDRKINSLGEHKVIPGDTAWLLYDTYGF
PVDLTSLIAEERGLTLDLESFEEERKAAQLKSQGKGTGDEDLLMLDIYAIEELRSQGLEP
TDDLPKYKYTSNADGVYEFESLIATVKAIRRDKMFVEEASTGQECGLVLDKTCFYAEQGG
QTYDEGYMVKEEESSEDKTEFTVRNTQVRGGYVLHMGTLYGHLKVGDQVRLYVDEPKRRP
IMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKGAMSTQEIRKTEEIANDII
KENKVVYALDCSLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVEDLLADPSSPAGSITSV
EFCGGTHLQNSGHAGPFIIVTEEAIAKGIRRIVAVTGAEAQKALRRQDALKVNLSDLEKK
VKKQNSPNKDVQKEIADLSENLATASIAQWQKDVLREQLKTLKKTMDDLDRASKADVQKR
VLEITKQLIEEHPNQPLLVLEMENGASAKALNESLKLLKSQSPHTAAMIFSVDNDAGKIT
CLCQVPQDTADKGLKANEWVQQVSDLMDGRGGGKDTSAQATGKNVGCLSQVLKLAEDFAK
MKLESMKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtgtatgacagcctctgaaatccggcagaagtttattgacttctttaaagaa
aatgcccacacatatgtccattcttctgccacagtccccctggatgacccaacactgctc
ttcgccaatgctggaatgaaccagtttaagccaatcttcctgaataccattgatccttct
catccaatggcaaagctaaaccgagcagctaatacacagaagtgcatccgtgctggaggc
aagcacaatgatctcgatgatgtgggcaaagatgtctatcaccacacattttttgagatg
cttggatcatggtcctttggggattatttcaaggagctcgcctgtaaactggcactggac
ctgctaaccaaggagtttggcattgacatagagcgcttgtatgtcacttattttggcggt
aatgaggctgctggtctagagcctgacttggaatgtaaacaaatatggctgaacttgggc
ctgccagagagtcgtatccttccaggaagcatgaaggacaacttttgggaaatgggtgat
acgggtccttgtggtccctgtagtgagattcattttgaccgaattgggggccgtgatgct
gcccatcttgtgaatatggatgatccaaatgtccttgagatctggaacctggtgttcatc
cagtttaatagggaaactgatggaaccttaaagccactgcctaagaagagcattgatact
ggaatgggactggaaagacttgtgtctgtgttgcaaaataagatgtccaactatgataca
gatctgtttgttccatactttgaagctatcgaaaagggcacaggtgcaagaccctacact
gggaaagtgggagctgaggatgttgatggcatagacatggcatacagagtgttggctgat
catgctagaacaattactgtggcacttgctgatggaggaagaccagataacactggacgt
ggatatgttttacgccgcatccttcgccgtgctgtgagatacgcccatgagaaacttaat
gcatctaaaggattttttgccactctggttgatgtggttgtccagtcactgggaaatgct
tttccagagcttaaaaaagatcctgatatggtcaaagacatcattaatgaagaggaaaca
cagttcctgaaaacacttaacaggggtcgtcgcatcttggaccgaaagataaacagtctg
ggagaacacaaagttatccctggtgacactgcctggctgctgtacgacacctacggcttc
ccagtggatttgactagtttgattgctgaggaacgaggactgacattggacttggagagc
tttgaagaggagcgtaaagctgctcagcttaaatctcaaggaaagggtacaggtgacgaa
gaccttctcatgctggacatctatgcaattgaagaactgcgttcccagggacttgaaccc
actgatgatctgccaaaatacaaatatacatctaatgctgatggtgtttacgaatttgag
agtttgatagcaacagtgaaagcaatccgcagagataagatgtttgtggaagaggcgagc
actggacaggagtgtgggctggtgcttgacaagacctgtttttatgcagaacagggaggg
cagacctatgatgagggctacatggttaaagaggaggagagcagtgaagataaaacagag
tttacagtgagaaacactcaggttcggggaggttacgtgctgcacatgggtacattgtac
gggcacttgaaagttggagatcaagtgcgtctatacgttgatgagcccaagcgtcgtcct
attatgagtaaccacacagccactcacatcctgaactttgccttgcgctctgttcttgga
gaagcagatcaacggggttcattggttgccccagacaggctaagatttgacttcacagct
aaaggtgcaatgtccacccaggagatccgcaaaaccgaagagattgcaaatgacattatc
aaggaaaataaggttgtgtatgcactagattgctctctcgcagaagcaaaagctatccag
ggtcttcgtgcagtatttgatgaaacatacccagatcctgtgcgtgttgtgtctatagga
attcctgtggaagatctgctggctgacccatctagtcctgctgggtctataacttctgtg
gagttctgtggaggaacgcatctccaaaattctggccatgctggtcctttcattattgtt
acagaggaagccattgccaaaggaattcgcagaattgttgctgtcacaggtgcagaggca
caaaaggccttaaggagacaggatgccctgaaagttaatctttctgatctggagaagaaa
gtgaagaaacagaattctcctaacaaggatgtacaaaaggaaatagctgaccttagtgag
aatctcgcaacagcatccattgcacagtggcagaaggatgtactaagggagcagctgaaa
accttgaagaaaactatggatgacctggatcgtgccagcaaagcagatgttcagaaacgg
gtattggaaataaccaaacaactcatagaggaacatcctaatcagccactacttgtactt
gagatggagaatggagcatctgcaaaggctttgaacgagtccctgaaacttctcaagtct
cagtctccccatactgctgcaatgatcttctctgtagataacgatgcaggaaagatcacg
tgtttatgccaggtgccccaggacactgcagacaaaggtctgaaggccaatgagtgggtg
cagcaagtatctgatttgatggatggcaggggaggaggaaaagacacctctgcccaagca
actggaaagaatgtggggtgcctgtcccaagtcctaaagctagctgaagattttgccaaa
atgaaactggagtccatgaaaaactga
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