Xenopus tropicalis (tropical clawed frog): 100492392
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Entry
100492392 CDS
T01011
Symbol
lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11 isoform X1
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100492392 (lsm11)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
100492392 (lsm11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM11_N
LSM
Motif
Other DBs
NCBI-GeneID:
100492392
NCBI-ProteinID:
XP_031754540
Xenbase:
XB-GENE-1007644
UniProt:
A0A6I8PWH2
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All DBs
Position
3:complement(13993691..13997653)
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AA seq
313 aa
AA seq
DB search
MKAAGRRDDAAGETGDAARSASMAEAEDEAPESCLDVSSESFNPLLALYSPQTPLPFPDV
RCFNNLAEYESFLRGGGRGRARGAQPGRAATRKGRKPAPDPERIERLKQLMVPGEEGKVP
VRPRRSRPPKNVLTRMPLHVGSPLGELNRCIQDRIRIKVHIRTFKGLRGVCSGFIVAFDK
FWNMAMVDVDETYRKPVLGKAFYNEPQLTLTRLFDRLQIQESGSHDPAKGRPIQTLPAGS
AEDLPPPPIKKSTQLREKTTGPVEPCPLGDSGIRPKQQRRNRKEKVDYQQVFSRHLKQLF
IRGENVLLVHIAE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcaggcaggcgggacgatgctgcaggagagaccggggacgcggcccggagt
gcttctatggcggaggcggaagatgaggcgccagagagctgcctggatgttagttcggag
tctttcaaccctctcctggccctttactccccgcagactccgctgccgttccccgatgtg
cgctgctttaataacttggcggagtatgagagctttctgcgcggcggaggcaggggaagg
gcccggggggcgcagccaggccgagcggcaacgcggaagggtagaaagcccgcaccggac
ccggagcgcatagagaggctgaagcagctgatggtaccgggggaagaggggaaagttcca
gtcagaccccgcaggagccgaccccccaagaatgtgctcacacgcatgcccttacatgtc
ggtagccccctgggggagctgaaccgctgcatccaggacaggatccggattaaagttcac
atccgcacatttaaaggcctgcggggagtttgttctgggttcatcgttgcctttgacaaa
ttctggaacatggcaatggttgacgtggatgagacctacaggaagcctgtcctgggcaaa
gctttctataatgagccccagctcaccctcacccggctctttgataggctacagattcag
gaatcagggtcacatgaccctgcaaaggggcgacccattcagacgttaccagctggatct
gcagaagatctccctccacctcccattaagaagtctactcagctgcgtgaaaagacaact
gggccagtagagccgtgccccctgggggattctgggatcagacccaagcagcagaggagg
aataggaaagagaaggtggattaccagcaagtgttcagccgccatctaaaacagctcttc
atccgaggggaaaatgttctattggttcatattgcagagtga
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