Xenopus tropicalis (tropical clawed frog): 100492543
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Entry
100492543 CDS
T01011
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100492543 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100492543 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
NBCH_WD40
NACHT
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
DUF4062
AAA_16
NPHP3_N
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_LRRK2
nSTAND1
Beta-prop_IFT122_2nd
Beta-prop_Nup120_160
APAF1_C
Beta-prop_WDR75_1st
Beta-prop_RSE1_2nd
AAA_22
ATPase_2
Nucleoporin_N
Beta-prop_RIG_1st
NPHP3
TniB
NB-ARC
AAA
Motif
Other DBs
NCBI-GeneID:
100492543
NCBI-ProteinID:
XP_002934424
Xenbase:
XB-GENE-985040
UniProt:
A0A6I8QJH2
LinkDB
All DBs
Position
1:111918857..111950779
Genome browser
AA seq
1615 aa
AA seq
DB search
MDSQGFKDILRGKETSLPTEPSNTVRLFISSTFSDMAEERNALMEFAYPDIQAFCQKHGL
GFEVVDMRWGVRDYATVDHRTKELCLKEIDFCQKTSMGPSFIALVGNRYGFRPIPRVISE
EEFNILFSKIQSNESDAQLLTKWFWKDMNTIPPTYVLQPITTHLPHYAATNPSFAELQAQ
EYKEWRNTEKQLTKALRLAALEAQIEGLITLEQKHKYFKSVTESEIECGLLACGANKEGS
TIFLREVKDLNQCQISGLLDVREDGSTDTEAQDLLQNLKNRILTDHKDCVKTHVVEMSIQ
KNKMAYLHKLCDQAIAVVNHQILKCLPSGNAGQSQSENQHPWLGWLRQEVIHHLSSSQKK
SQVFSGRQDLLQKIMSYIQERHSQVYPPLIIHGVSGSGKTALMCKAFEMLKQTNNGSSLM
VLRLLGTSPQSSEIHDVLKSICYQLCIALELQPPSSQITNIYNETVRFFHQLLTTVSERK
VENLVLFFDSLDQLSPSEGAHRLHWLPKECPANVCIVVSTLPEEGGILKTLKDSVTDPEC
YIEVKPLSAEQGSQMIEMLMASAGRRLTNDQQEIVLGSFRKCGQPLLLKLAFDEAKRWSS
YTPITELMIATSTKEAVSLLYQCLEQLHGKLLVSHALGYIVASRSGLSEAELKDILSLDD
EVLADIYQYWAPPSNDLIRFPTLPWTRLRNDLEGYLVERQADGSTVLGLYHRQFIEVARD
TYLTNTEKSNRHGTLADYFMGKWSMGTKRPILLPLINKSLNADRKVASQPLWFSDNMPNR
RKMSELPYHLLNAGCIDELQGEILGNMDWISSKIVSCGIQSVIKDFEMSVKLISSREIML
LRDTLRLFQPTINFIEGVIDPVIVFTEMLARMHFFQLSYRLIDELCQQCTGWLHQYPHPT
FIPTCGFFQPPGGPLQTTVTGFKKGVTVMELCPDHDLLVVGSEDGIMIVWNIKDIEVIHT
LTGHNDGIRCIKMFEKGTRAVSGSLDHTLLLWNLVTGKQYLCIHEDHTTYENAYLHVDEK
NSIIYSAAGSQVYAWKIESGAPLLNLSPGVPNFPLQAAVFCAHQLLITVTEGGTVHLWDS
ATGELKGSRQLPGVGGEDANPVCSCFIPRHGKMVVGFENGFLAVISSGGGVSTEKMSSAV
VFVVPSEDESLFAAGFGKQVQIFRADSNALRTFLDSPLEHEDFVKSVVINNGRNIILTGS
QDETIRIWSLSHRGTLLDTFYGMGVSVTSLALHGGTLISSSKNAYYLKLWTLDYDQQHKT
LTPFQERSGCVALSDAGNRVYFPKTGDKHKIVVWDSKQGRMADIVEASAEVKCLEVAENS
RILFVGLTSGTVLAFPLDQKQDVACIPPPGNNMEVVCLSLSKQENRLAVAYHNLILLYDV
TKGDPLPVLDGPIHSVHPGSTSSICKTAVLEDQRLLYGMASGEIYLFNCEMDNTCQLEPH
ERCITCLETSNSETLALSGCEDSVQRLWNIDSGQWVHEMCYKGFFFQGVDCACFSKDDRF
IFTGSQDRAIKAWDVSSGSLLAVQYVYASVTRLLPTAEGFIGTTKLGYIIRETFQCPQNI
SPQYNALKNIKATCTVKSRNTVHNEKAGKVTAKMGKPWWRCKEQNNKTSQICQIV
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggactcacaaggctttaaagatattctgagagggaaagaaacatccctgcctacagaa
ccatcaaatactgtcagacttttcatcagttccaccttctcagatatggcagaagagcgt
aatgcacttatggaatttgcttatccagacatacaagccttttgccagaaacatggtttg
gggtttgaggtggtggatatgcggtggggagtccgagattatgccactgtagatcacagg
actaaagagctgtgcctgaaagagattgatttctgccaaaaaacatcaatgggaccgtca
tttattgctttggtcggaaatcgttatggttttcggcccattccaagagttatcagtgag
gaggaattcaacatcctgttcagcaaaattcagagcaatgaaagtgatgctcaactgctg
accaagtggttttggaaagacatgaatacaattcctcctacatatgttttgcagccaatt
acaactcatctacctcattatgctgctactaacccttcctttgcagaactccaagcccag
gaatacaaggagtggagaaatactgaaaaacagttaactaaagctctacgcttagctgct
ctggaggcacaaatagaagggcttattacattagagcagaagcacaagtattttaaatca
gtaactgaatcagagattgaatgtggcctgttagcctgtggtgccaataaggaaggctcg
acaatatttctgcgagaggtaaaagatctaaaccagtgtcagatctctggactcttagat
gtcagggaagatggaagcacggacacagaagcacaagaccttttacaaaatcttaagaac
agaatactgactgatcacaaagactgtgttaaaacacatgtagtggaaatgagtatacag
aagaacaaaatggcttatcttcataaactctgcgatcaagctattgctgttgtcaaccac
cagatactgaagtgtcttccaagtggaaatgctggtcaatcacagtctgagaatcagcat
ccttggttggggtggcttagacaagaggtcatacatcacctgtcctcgtcacagaaaaaa
tcccaggtattttctgggcgtcaagacctgctgcaaaagatcatgagttacattcaagaa
aggcactcacaggtgtatccacctctgatcattcatggggtatctggctctggaaagact
gcccttatgtgcaaagcttttgaaatgttgaaacagaccaacaatggaagctcacttatg
gtgctccggctgcttggcacttcaccacaaagctcagagatccacgatgttcttaagagt
atttgttaccagttgtgtatagcactggaacttcagcccccttcttcccagattactaat
atctacaatgagacagtaaggtttttccaccaacttcttaccactgtgtccgagaggaag
gttgaaaacttggtgctgttttttgactctcttgaccaactctcaccatcagaaggtgcc
caccgtcttcactggttgccaaaggaatgtccagcaaatgtttgcattgtagtgtccaca
ctgcctgaagaaggaggaatacttaagacactaaaggattcagtgactgatccagagtgt
tacattgaggtgaagccactctctgctgagcaaggaagtcaaatgattgagatgctcatg
gcttcagctgggcgtagattaaccaatgaccagcaggaaattgtattaggcagctttagg
aaatgtgggcaaccattgctccttaaactggcatttgatgaagccaaaagatggtcatct
tatacaccaatcacagaactcatgattgccacaagcacaaaagaagcagtgagtctcctt
taccaatgtttggaacagctgcatggaaaattattggtgtcccatgctctggggtacata
gtggcatccaggagtggactgtcagaggcagagttgaaggatatactgtctttggatgat
gaggttcttgctgatatataccagtactgggctccaccaagcaatgatttaatacgattt
cccaccctcccatggacccgtctaagaaatgatttggaagggtacttggtggaacgacaa
gcagatgggagcactgtcctgggactctatcacagacagtttattgaagtggctcgagac
acctacctgaccaacacagagaagagcaatagacatggcacactggcagattactttatg
ggcaagtggagcatgggcactaagcgtccaattctcttaccgctaatcaataagtccttg
aatgcagacagaaaggtagcatcacagccactgtggttctcagataacatgcccaaccgg
agaaaaatgagcgagcttccctatcacttgctgaatgcaggatgcattgatgaactacaa
ggggaaatattgggtaacatggactggatatctagcaaaattgtttcctgtggaattcag
agtgtgatcaaagattttgagatgagcgtgaaattaataagtagtagggaaataatgctt
ctgcgggacacattaaggctcttccaacccactattaattttattgaaggtgtcatagat
cctgtcatcgtattcacagagatgttggcaaggatgcacttcttccagttgtcgtatcgt
ctgatagatgaattgtgccagcagtgcactggctggcttcaccaatatcctcatcccacc
tttattcctacatgcggtttctttcaacctcctggaggacctctacaaaccactgtcaca
ggtttcaagaaaggtgtcactgttatggaactttgccccgaccatgatcttcttgtggtg
ggatctgaagatgggattatgattgtgtggaacataaaagatattgaagtcatacatact
ttaacaggccacaacgatgggatacggtgcattaaaatgtttgagaaggggaccagagct
gtctctggctcattagatcacactttgctgttgtggaacttagtgactggtaagcaatat
ctgtgcattcatgaagaccatacaacctatgagaatgcttatctgcatgtggatgagaag
aacagtatcatatactcagcagcagggtcacaggtctatgcttggaagatagagtcagga
gctcctctactaaatctttctcctggtgttcctaatttcccattgcaagctgcagtgttt
tgtgctcatcaactgcttattactgtgacggagggtggaacagtacatctttgggacagt
gccacaggcgagctaaagggatcaaggcagcttcctggagtgggtggagaagatgcaaat
ccagtgtgtagttgcttcatccccagacatggaaagatggtggttggattcgaaaatggc
ttcttagcagtgatttcttcaggcggaggtgtttcaactgagaaaatgtccagtgcagtg
gtgtttgtggtgccatcagaagatgagtccctctttgctgctggatttggaaagcaggtc
cagatttttcgggctgattcaaacgcacttaggacattcctagattcacctctggaacat
gaggattttgtgaaatctgtagtaatcaacaatgggagaaacattatattaactggatcc
caagatgaaaccatcaggatatggagtctgtctcacagaggtactctgctggatactttc
tatggcatgggtgtttctgtcacttcattggcactgcatggtgggacattaatatcatcc
tcaaagaatgcctactatctaaagctttggaccctggactatgatcagcagcacaaaaca
cttactccttttcaagaacgcagtggctgtgtcgcgctctctgatgcaggaaacagagtg
tattttcccaagactggtgacaaacacaaaattgttgtctgggactctaagcaaggtaga
atggctgatattgtggaggcctctgcagaagtgaagtgcttggaggtggctgagaacagc
agaattttgtttgttgggctaacttcaggaactgtcctggcattccctctggatcagaaa
caggatgttgcgtgcattccaccccctggaaacaacatggaggtggtctgcctatcactg
agcaagcaggaaaaccgactagctgtggcataccacaatctcatactactttatgatgtt
accaagggtgacccacttccagtgctagatggtcccatccactcagtccatccaggcagc
acaagttctatttgtaaaacagctgtcctagaggatcagagacttctgtatgggatggcc
agtggagagatatatctttttaattgtgagatggataatacttgccagctggagccacat
gagcgctgtatcacatgcttggaaaccagcaacagtgagactcttgcattaagtggctgc
gaggactctgtgcaacgtctttggaacattgacagtggccagtgggtgcatgagatgtgt
tacaagggatttttcttccaaggtgtagactgtgcctgcttctccaaagatgatcggttt
atttttactggatctcaagatcgagccattaaagcatgggatgtttcaagtggttcgctg
ctagcagtacagtatgtatatgcttcagtcacccggctactcccaacagcagagggattc
atcggtaccacaaaattgggatacattatacgggaaacgtttcagtgcccacaaaacatc
agtccccaatataatgcactgaagaacattaaagctacctgcacggtgaaatctaggaac
actgtgcacaatgaaaaagctggcaaagtcacagcaaagatggggaaaccatggtggagg
tgcaaggaacagaacaataaaacatcccaaatatgccaaattgtttaa
DBGET
integrated database retrieval system
