Xenopus tropicalis (tropical clawed frog): 100492884
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Entry
100492884 CDS
T01011
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100492884
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100492884
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Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF6376
RNase_H_2
Nmad5
Motif
Other DBs
NCBI-GeneID:
100492884
NCBI-ProteinID:
XP_002934426
UniProt:
A0A803JIE1
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All DBs
Position
1:complement(111724051..111738933)
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AA seq
632 aa
AA seq
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MDESHKKDQASDKLLFRDAGNGGAQSDLFLKLQEVISSLESYAWSWRSPSGSGSVDESNT
ASGDTTPCSSILSFPLLAGLTEELQRVLPHDENWLQSEISRYRQENTALRAKLRVTDTEL
DNSKLTLMEMMEEKDTLQIEISKLQGYPQEDSFFSPSTSVPSSPDSAESCTPTTETPLAL
NDPLSRMQAPISTLQNLIQYLQDLSGMQPSLPCAPKVQPSYLETEMEWLKGKLDCLKRLN
AQLCVTLEECKSDSEKLSMHLGRLESTCTAFRLALQSSEKCLKAYSVMLALTEAKGDIIL
GQMAEGDLLKSGWSLLPKDLEIKTKLFMMEVKKTFKQDRTKLEADKGDPRSPSLPRFYSP
WLSEEDEQMLKSYVQHLKQDVASISIMENLQMGQDVHSEVAHLADVIKTKADNAIEVSSE
TSASRPDKPLRSHIVQELLDTKEGLAEVKGSIQLLQTEKRALELQSLSYLEEEKAYMLIR
DQLQQELSDWAEKSKEEDCGGKHPVYGRAVSDYCEQSIPHANMQRLLESLARSSETRARV
EGLSEELDELTCRVHAQRAQSAKIIMDFFKAHRNLFMTYQNAQKKYHEQQRRLESQAHMM
SQCHIQQLHDLMQNILSLQAQQTARETGETSL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctcacaaaaaagatcaagcttctgacaagttactgttcagagatgctggc
aatggaggtgctcaaagtgacctgtttctaaaattgcaggaagttatttcttctctggaa
tcgtatgcatggtcctggaggagtccatctggaagcgggtctgtggatgaaagcaacacc
gcttcaggggacacaacaccttgcagttctatcttgtcttttcctctcttagcagggtta
actgaggagcttcagagggtgctgccacatgatgagaattggttacagtctgaaatctca
agatatcgacaggagaacacagccctgagggccaaactgagggtcacagatacagagctg
gataactcaaagctcactcttatggaaatgatggaagagaaggacacattgcaaatagag
ataagcaagctacagggctatccacaggaagattcctttttttctccatccacctcagtg
ccttcaagtcctgattcggccgaatcgtgcactccgactacagaaaccccccttgcactg
aatgacccactttccaggatgcaagctcccatttcaacactacaaaatctgatccagtat
cttcaggacctttctggaatgcaaccttcattgccatgtgcacctaaggttcaacctagc
tacttggaaacagaaatggaatggctgaaaggaaaacttgattgcttgaagaggctaaat
gcccagctctgtgtgactcttgaagagtgtaaaagtgactctgaaaaactcagcatgcat
cttggaagactcgagtccacctgcactgcttttcgtcttgcccttcaatctagtgagaag
tgtctgaaggcttacagtgtgatgctagctctcacagaagcaaaaggagacatcatccta
ggacaaatggcagaaggagaccttttaaaatcaggatggagtttgctacccaaggattta
gagattaaaaccaaactattcatgatggaggtgaagaaaacattcaagcaagatagaacc
aaactggaagcagacaagggagaccccagaagtccatcattgcctagattttattcacct
tggctcagtgaagaagatgagcaaatgttaaaaagttatgttcagcacctaaaacaagat
gttgcatctatcagtataatggaaaatttgcagatggggcaagatgtccattcagaagtt
gctcatcttgctgatgttatcaaaacaaaggcagacaatgccattgaggtatcatcagaa
acttctgcgagccgccctgacaaaccactcagatcccatattgtacaggagctgttggac
accaaagagggtctagctgaagtcaaaggaagcattcagttgttacagacagaaaagcga
gcattagagctgcagagcttgtcttatctggaagaggagaaagcttacatgctcattaga
gatcagctgcagcaagaattgagtgactgggcggagaaatcaaaagaagaggattgtggg
gggaagcatccagtttatggaagagcagtgtcggattattgtgagcagtctattcctcat
gctaatatgcagcgtctattagagtctttagcacggagcagtgaaacaagggctcgcgtg
gaaggtctcagcgaagaattggatgaactaacttgtcgtgttcatgctcagagggcacag
tctgctaagattattatggatttcttcaaagcccacaggaatctgttcatgacataccag
aatgcccaaaaaaagtaccatgagcagcaacgcagactggaatctcaggcacatatgatg
tcacagtgtcatattcaacagctacatgatctgatgcaaaatatcttgagtctgcaggca
cagcaaactgctagagaaacaggcgagacatccctataa
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