Xenopus tropicalis (tropical clawed frog): 100492927
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Entry
100492927 CDS
T01011
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100492927 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xtr04031
]
100492927 (rab40c)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
100492927 (rab40c)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
100492927 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100492927
NCBI-ProteinID:
XP_004918047
Xenbase:
XB-GENE-6461049
UniProt:
A0A803JAB6
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All DBs
Position
9:complement(22628047..22647135)
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AA seq
286 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGASESPYSYSNGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARSYAEKNGMTFFEVSPLCNFNVTESFTELSRIVLMRHGM
EKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSVAGSSGGATGGGGGSKGNSLKRSKSIRPPQSPPQNCSRSNCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcagggcagcccggtgaagagctacgactatctgctgaaattcctgctggtg
ggagatagtgacgtgggcaaaggggaaatcttggagagcttgcaggacggggcatccgag
tcgccgtattcctacagtaatggtattgactacaaaactaccaccattctgctcgatggt
cggcgggtcaagctggagctgtgggacacctcgggccagggtcgattctgcaccatcttc
cgctcctattccagaggagcccaggggattctcttggtatatgacatcacaaaccggtgg
tctttcgatgggatagatcgctggatcaaagagatagatgagcacgcgccgggggtcccg
cggatccttgtaggaaacagacttcacttggccttcaagcgccaggtacccaccgagcaa
gcgcgtagctatgccgagaagaacggcatgaccttttttgaagtcagccccctctgcaac
ttcaacgtaacagaatccttcacggagctgtcccgcattgtcctaatgaggcatggcatg
gagaagatctggaggccaaacagagtgttcagcctgcaggacctgtgctgccgtgccata
gtatcctgcaccccggtgcatctcatagacaagctccccttgcccgtggccatcaagagc
cacctcaagtccttttctatggccaatggaatgaatgcagtgatgatgcacggacggtcc
tattctgtggctggcagcagtggtggagccacaggaggcggaggtggaagtaagggcaat
agtcttaaacgttccaaatccatccggccgcctcagagcccacctcagaactgctcaaga
agcaactgcaaaatatcttag
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integrated database retrieval system
