Xenopus tropicalis (tropical clawed frog): 100493119
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Entry
100493119 CDS
T01011
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100493119 (ttf1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
100493119 (ttf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_4
Motif
Other DBs
NCBI-GeneID:
100493119
NCBI-ProteinID:
XP_031746750
Xenbase:
XB-GENE-953700
UniProt:
A0A6I8Q552
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Position
8:11733479..11756287
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AA seq
940 aa
AA seq
DB search
MKEAVQMPSHVSSDDPSQGLNDHPVKMKNKKKAKSRSKEAVENTCNVEAESRIADPVHLE
VGSEDVPSTPHKRKKKKKNLGSPLDSTSDCYSALTGTSGSDLTVPLDGLEKSAKKKKRHF
SHQDVSPSVLQPASPSVGYTSIPMQTECDTPDTHRKSKKKKHTEETITTVGLMEISNMED
KRETLDMAVKKKKKKVREGNSSASVLMDTDCVLLGDTTLAEQTDPEEPPMFKKKKKKHKI
QDDENIQQTTGMIGTASEASTPKRKRGQEKSDEIMECNMEEQNGDTVPHTLSKRKKKISS
HVLEETTDPSHGLSSELDLSLGSLEKPPRKKKKHSEDTDSTSGLLNSSSNAGGDSILEQT
DSEEQTFQKSKKKKNRDCDQNLGEKGFLLESSDHDVPLMVKKKKKKKKSHELEQECFGDL
EEDAEPEVCGLTLSVTKKKSKKRNRSDMEEDQSLVESCSIGEITHDEIDEQQEPENFSSL
SSRVRRESRSESQEKASETDHGTGNTDEGRGDQETNTTDSRIGMAVEAGLENKRKKRVRR
FPPLRQRDLELLKEYFPNLERRTNSTISHIVREDLERIRAAKIKGIPFMTGRFTTEENQR
LEENVKEFMALTGISSGDKLFSSFKYPDEKSLIERVKRMYNFRRRIAEGIPRTTTEVFIR
GGKMFDLTSNKGHYSKEEVEQLKKHMEMHGNKWRTIAPLMGRNNVTLQLKASQMRRETNS
GKWSAEEVNKLIDALKNFIVKPGKGPLDTIAKCDLYSGIPWVQVEEKVETRNWSQCKIKW
SEILLLRMNNGVNVFQGASGIELLINMIKWLHDFGPAESGQIKWEELAEVLGNIPPLLLQ
NKFVYIKRRYIPDYHNLTHQEILYHLYTETIPHLEERLNTFMLRQEEDIQPVVEKSDSYL
INEIFCEYIGKEHEDALYITQREKRKRKRKTRGKEKCDMF
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggccgtgcaaatgcccagtcatgtctcttcagatgatcccagccaaggttta
aatgatcacccagttaaaatgaagaacaagaaaaaggccaaatcacgttctaaggaggct
gtagaaaatacctgtaatgttgaagcagaaagcagaatagctgatccagttcatttggaa
gttgggtcagaggatgttccttccaccccacataaaagaaagaagaaaaagaagaatctc
ggatctccgttagacagcacctcggactgttatagtgctttaactggcacctctggcagc
gacctgactgtgccacttgatggtctggagaagtctgccaagaaaaagaagaggcatttc
agtcaccaagatgtgtctccttcagtattacagcctgcttccccctctgtagggtacact
tccatccccatgcagactgagtgtgacacccctgatacccataggaagagcaaaaagaaa
aagcatacagaagagaccataacaacggttggtttgatggaaatatccaatatggaggac
aagagagaaactttggacatggcagtcaaaaagaaaaagaagaaagttagagaagggaat
tcatctgcttccgttttaatggacacagattgtgttttgctaggagacaccacccttgct
gaacagacagatcctgaggaacccccaatgtttaaaaagaagaagaaaaaacacaaaata
caggatgatgagaatatccaacagaccacgggaatgatcggcacagcctcagaagcctca
acgccaaaaagaaagagaggccaagaaaaaagcgatgagattatggagtgcaatatggag
gaacaaaatggagacactgtccctcacaccctgtccaaaagaaaaaagaaaatttccagc
catgtattagaggagaccacagatcctagccatggtctctccagtgagcttgacctatct
ttgggcagtttggaaaagcccccaagaaaaaagaagaaacattcagaggacacagattcc
acttctggtttattgaattcctcctctaatgcaggaggcgattccattcttgagcaaact
gattcagaagagcaaactttccagaagagtaaaaagaaaaaaaacagagactgtgaccaa
aacctgggagaaaaaggttttctgctggaatcatctgaccatgatgttcccctaatggtc
aagaagaagaaaaagaagaagaagagccatgaacttgaacaggaatgttttggagatctg
gaagaagatgcagagcctgaagtttgtgggctaacattgtcagtgactaaaaagaaatct
aagaagcgcaatagatctgacatggaagaagaccagagtttggttgaatcgtgcagcatt
ggtgaaatcactcatgatgaaatagatgagcaacaagaaccagagaacttttccagcctg
tctagcagggtaagaagagaaagcaggtcggagtctcaggagaaggcttctgaaactgat
catggaaccggcaacacagatgaaggcagaggagaccaagagaccaacacaactgatagc
aggattggtatggctgtggaagctggtctagagaataagagaaagaaaagagtcagaaga
tttccacctctacgtcagagagacctggaacttcttaaggagtatttcccgaacctggaa
agacgcacaaattccaccatcagtcatattgtgagagaagacttggaaagaataagggca
gccaaaataaaaggtatccccttcatgactggcaggttcaccactgaggaaaaccagcgg
ctagaggagaacgttaaggaatttatggctcttactggaatctcctcaggagataagctc
ttcagcagttttaaatatccagatgagaagtcgttgatcgagagagtgaagcggatgtac
aactttaggcgtagaatcgcggaagggataccccgtacaactacagaagtgttcatccga
ggaggaaagatgtttgacttgacaagtaacaagggacattactcaaaggaggaagtggag
cagttgaagaaacacatggaaatgcatggaaataaatggaggaccatagcgcctctgatg
ggacgcaataatgttacgcttcagttgaaggcatcccagatgagacgagagaccaacagt
gggaaatggagtgcagaggaggtgaacaagttgattgacgcactaaaaaatttcattgtc
aagccaggcaaagggccgctggataccatcgctaaatgcgatctgtactccggaattcct
tgggttcaagtggaggaaaaagtggagacaagaaattggtcacaatgtaaaatcaagtgg
tctgaaatcctgctactgaggatgaataacggtgtaaacgttttccaaggagccagcggt
atcgagctactaatcaacatgatcaagtggttacatgattttggaccagcagaaagtggt
cagataaaatgggaagagctggcggaggttcttgggaacatcccaccactgctgcttcag
aacaagtttgtttacatcaaaaggagatacatccccgactatcacaatctgactcaccaa
gaaattttgtatcatctgtacacagaaaccatcccacacttagaggaacgcctgaataca
ttcatgctgcgacaagaggaggatattcagcctgtggttgaaaaaagtgattcttatctc
atcaatgaaatattctgtgaatatatcggcaaggagcacgaagacgcgctatacattacg
caaagagaaaaaaggaagagaaagcggaaaacgcgagggaaagaaaaatgtgatatgttt
taa
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