Xenopus tropicalis (tropical clawed frog): 100493120
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Entry
100493120 CDS
T01011
Symbol
nkx1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100493120 (nkx1-1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100493120 (nkx1-1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100493120
NCBI-ProteinID:
XP_002936812
Xenbase:
XB-GENE-488879
UniProt:
F6UE28
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Position
1:complement(19690801..19699224)
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AA seq
408 aa
AA seq
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MNATREKVQLDMPIGGAQAAGVVEAVTCGLHGEMMDSHGEQRLTASDLPAYGCPRDRQGD
HPNCNAPAGPESLGAAPLAVHRTTSFSVLDILDPNKFNSKQRHCSGAYKPPGDYILRGEE
KAEGPDIATGQKAFLEEYESCKKSTEVIKEEGLYQHSATEDCQTQEFSPSPGSDLEEEED
EEEDEEICSEESSNSTPSGLAERDPGAGNGQGEDALNTGAPAGSNQQQPTGKNQQQQNQH
GKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQ
VKIWFQNRRTKWKKQNPGADTSAPTGGSGHGGGGSGSVLGGGLSPLSHSPPMGNPMALHG
HHGYPSHAPGGLMCTAQLPFLPGPAAVLSPFVLSSQSYGAPAFYAPHL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaccagagagaaggtccagctggacatgcccattggaggtgcccaggcagcg
ggggtggtggaagcggtgacctgcggtctccacggagagatgatggacagccatggggag
cagagactgactgccagcgacctgccggcctatgggtgcccaagggacagacaaggggac
cacccgaactgtaacgcacctgctgggcctgagagcttgggggctgccccgcttgcggtc
cacagaaccacgtccttctcggtgctggacatcttggaccctaacaagttcaacagcaaa
cagagacactgctctggggcatacaagccccccggcgattatatcctgaggggagaggaa
aaggcggagggtcccgacatagcaacgggccaaaaggctttccttgaagaatatgagtcc
tgcaaaaagtccactgaagttataaaggaggaggggctgtaccagcactcggctacagag
gactgtcagacccaggagttcagccccagcccgggcagtgacctggaggaagaggaggat
gaagaggaagatgaagagatctgcagtgaggagagcagcaattccaccccttcaggtctg
gcagagagggacccaggggccgggaatggccagggtgaggatgccctgaatactggggcc
cctgccgggtccaaccaacagcaacccactgggaagaaccaacagcagcagaaccagcac
gggaagcccaaaaggaagcgcaccgggtcggactccaagtcggggaagccccggagagcc
cgcaccgcattcacctacgaacagctggtggcgctagagaacaagttcaagtcgacccgg
tacctgtcggtgtgtgagaggctcaacctggctctgtccctcagtctcaccgagacccaa
gttaaaatctggttccagaaccggcgcactaagtggaagaagcagaaccctggggctgac
actagcgcccccactggggggtccggccatgggggaggtgggtctggatctgtgttggga
gggggtctcagccctcttagccactcgccccccatgggaaacccaatggccttgcatggc
caccatggctaccccagccatgcccccggggggttaatgtgcactgcccaactgcccttc
ctgccgggtccggccgctgtactgtccccctttgtcctgagctcccagtcctatggggcc
ccagcattctatgcccctcacttataa
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