Xenopus tropicalis (tropical clawed frog): 100493122
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Entry
100493122 CDS
T01011
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100493122 (ap5b1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
100493122 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
SPK
RXLR
Motif
Other DBs
NCBI-GeneID:
100493122
NCBI-ProteinID:
XP_002937091
Xenbase:
XB-GENE-6464234
UniProt:
A0A6I8PUR5
LinkDB
All DBs
Position
7:94446386..94455439
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AA seq
924 aa
AA seq
DB search
MAERNSASWNRKVASFCSEPKTFLCDSSVDGFLGELLKDLQSEAIHGQTKILMMDLLLEF
PEFLCPDQKTVEMTAETLMNILKKMPSSERSMTLRCHLLLAIETVLITCESFNQNSKMAQ
DFASLLMHIISDVNDKKQGVANRPLRTTACECLRELESCYPGFLSQRMEKLYLMQQQEVT
AAHQSYTLLYTVVLKNAIRFLAQKEGPSNGALKNALLSNEDFFWSATENMVELQPSSNEQ
LLLLPSNSETKDLKSILALLLEDSYLLTPVCQNTLFWQIVQVVAMARTISPVIFKSQLVR
LFSTMDLSCFHSILQMKAVFTDSLFTGEDEHFLIQRLVGMTQHPLLSTPVKLFYLDCLLH
FPENRPLTSNSEENLPVLLTVQMTSSLFPNVFNDHSTMLCRQNVLSMVYLENEGSYSEKG
IAFLFEHVMSLYSMVHKNGNREITATFFRAVHLFVQYFNFCEKHMENLTEKLLKLYMSNS
SLAPNFINLINQTQILLEFHVWPVTLSKALQKEIVNLPTDKWTMKNLGWHLKILSRVAQE
NSISQSSTALFLRRVVFCSDLCSKGDWRTGNALLSVCKHVLQHQKLSAIFVHLADLLQYL
MHRFEDIDVQDRARLYYVLLTNVSSDKLGKILTMSPARGQTKSRSLSSIMTENENFSTML
TIRNAEKTLLCLQPVLEGIKAFTCISDSPRSVNECSFEEYYKHCADNSSSLLTLKYHLAF
KEMSEPKYHNLYCIVLQFENTDCRFESISDINVPCLFVDRKPPVVTINLVPKEPYPTIFS
VSATYSTQDGITYQTKLDPLYITFREMFIPLPLPALWPLESRFDLFGKLWSAFKPDEQNQ
FEESIFCYEMSNNSLHDIVLDNFSKFAVSCNGGEYKIAVFLPPQFHILMHIKSQDDTACF
SVRTDNWNLLPYLNSHLLDITLQK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaggaacagtgccagctggaaccgtaaggtggcttcattttgttccgagcct
aaaactttcttatgtgactcctctgtggatgggtttttgggagaacttctgaaagatctt
cagagtgaagctatacatggccaaactaagattttaatgatggacctcctactagagttc
cctgaatttctgtgcccggaccaaaaaacagtggaaatgactgcagagacattaatgaac
attttaaagaagatgccaagctcagagagaagtatgactttaaggtgccacctcttgtta
gcaattgagactgttttgattacatgtgaaagcttcaatcagaacagcaaaatggcacaa
gactttgcttccctactaatgcatataatatcggatgtgaatgacaaaaagcaaggcgtt
gcaaacagacccttacgcactacagcttgtgaatgtctgcgggaactggagagctgctac
ccagggtttctgtctcaaagaatggagaagttgtacttgatgcaacaacaagaggtgact
gccgcacatcagtcgtacacattgctctatactgttgtattgaaaaatgcaatacgattt
ttagcacagaaggaagggccatccaatggtgcacttaagaatgccttgttgagcaatgaa
gactttttctggagcgcaactgaaaatatggttgaattacagccatcatctaatgaacag
ttattattgctcccatccaacagtgaaacaaaggatctgaaatccattttagctttactg
ctcgaagactcctaccttcttacaccggtttgccaaaacactctgttctggcaaatagtt
caagttgtagccatggcccgtaccatctcaccagtgatcttcaaatctcagctagtgagg
ttatttagcacaatggacctgtcttgttttcacagcatactgcaaatgaaagctgtgttt
acagatagcctgttcacgggagaggatgaacatttcctcattcagagactagtgggaatg
acccaacacccacttctgtctacaccagtcaaactcttttatttagactgtcttttacat
tttccagaaaacagaccccttacttccaactctgaagagaatttgccagttctgctcaca
gtccaaatgacttcttctttatttcctaatgtttttaatgaccacagcaccatgctgtgc
agacagaatgtattaagcatggtttaccttgaaaacgaagggtcctattccgaaaagggt
atagctttcctttttgaacatgtcatgtctctttacagtatggttcataagaatggcaac
agagaaataacagcaacttttttccgagccgtgcatttgtttgttcaatattttaacttt
tgtgaaaagcacatggaaaatctgacagaaaaactgctcaagttatatatgagcaatagc
tcattggctccaaattttatcaatctcattaaccagacacaaattttactggaattccat
gtttggccggttactttgtcaaaggctttacaaaaagaaatcgtgaatcttcccactgat
aaatggactatgaaaaaccttggatggcatcttaagattctctcgagggttgcccaggaa
aattcaatatcacagagcagcacagccctgtttttaaggcgtgtggttttctgttctgat
ctgtgcagtaaaggtgattggaggacaggaaatgcactgctctctgtatgtaagcatgta
cttcaacatcaaaaactcagtgctatttttgtgcatttggcagatctcttacaatatcta
atgcatcgttttgaggacattgatgttcaagaccgtgcccggttgtattatgtgcttcta
accaatgtttcaagtgacaaacttggaaaaattctaaccatgtcaccagctcgaggccaa
actaaatctaggtccttatcctcaatcatgactgaaaatgagaatttttccacaatgcta
accatacgtaatgctgaaaaaacattattatgtttgcaacctgtgctcgagggcataaaa
gcttttacctgtatctcagattcccctagatctgtaaatgaatgttcttttgaagaatat
tataagcattgtgctgataacagctcttctttgcttacactaaaataccatttggcattt
aaagagatgtctgagcccaagtatcacaatctctactgtattgtactccagtttgaaaat
acagattgtaggtttgagtctataagtgacattaatgttccatgcttattcgtggacaga
aagccaccagttgtcactataaatttagtgccaaaagagccttacccaaccatcttttct
gtaagtgccacatacagtacacaagacggcatcacttatcagacaaaactggacccactt
tacattacctttcgggaaatgtttattccactcccactgcctgctttatggcctttagaa
tccagatttgatttgtttggcaagctttggagtgcctttaagcctgatgaacagaatcag
tttgaggagagcatattttgctatgaaatgtcaaataactctcttcatgatattgtgctg
gataacttttccaagtttgctgtgtcctgcaatggcggggaatacaaaatcgctgtgttt
ttacccccacagtttcacatattaatgcacattaagagtcaagatgatactgcctgcttc
agtgttagaacagataattggaacttactgccttatttaaattcgcaccttttagatatc
acgttacaaaaatga
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