Xenopus tropicalis (tropical clawed frog): 100493222
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Entry
100493222 CDS
T01011
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5
KO
K09383
paired box protein 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100493222 (pax5)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100493222 (pax5)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_32
HTH_23
DUF6115
HTH_Tnp_IS1
Homeodomain
Motif
Other DBs
NCBI-GeneID:
100493222
NCBI-ProteinID:
XP_012808654
Xenbase:
XB-GENE-479876
UniProt:
A0A803JA11
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Position
1:109328162..109448879
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AA seq
388 aa
AA seq
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MEIHCKHDPFAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAE
RVCDNDTVPSVSSINRIIRTKVQQPTNQQVPPSNHSIVSTGSVTQVSSVSTDSAGSSYSI
SGILGITSSNAETNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLDVLDRVF
ERQHYTDIFTTTEPIKPEQTEYSAMASLTGGLDEMKSSLTSPSSADIGGSVPGPQSYPLV
TGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSDFSGSPYSHPQYSSYNDSWRFPN
PGLLGSPYYYSAARGGAPPATAAAYDRH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacactgtaagcacgacccgtttgcagcaatgcatagacatggaggagtgaat
cagctaggcggggtatttgtaaatgggaggccccttcctgacgtagtccgacagagaatt
gtggaactggcccatcaaggagtaaggccgtgtgacatctcccggcaactacgagttagt
catggatgtgtcagcaaaattcttggcaggtactatgaaactggaagtataaagcctggt
gtgattggaggatcaaagccaaaggttgcaacacccaaagttgtagaaaaaattgctgag
tacaagcgtcaaaatcccaccatgtttgcatgggagattagggacagattattagcagaa
cgggtgtgtgacaatgatacagttcccagcgtcagctccataaacagaatcatccgaact
aaggttcaacagccaacaaatcagcaagttcctccatccaatcatagcatagtttccact
ggatctgtgactcaggtctcttcggtaagcactgattcagccggatcatcttattctatc
agtggaattctgggaattacatcatcaaatgcagagactaacaagcgcaaaagagatgaa
ggtattcaagaatctcctgtaccaaatggtcattcacttccaggaagagatttcttaaga
aaacagatgagaggtgacctctttacgcaacagcagttggatgtattagatcgagtgttt
gagagacaacattacacggatatctttactactactgaacctattaagcctgagcagaca
gaatactcagccatggcatcgctaacagggggtttggatgaaatgaaatctagtctaaca
agtccatcttctgcagacataggtggatctgttcccggacctcagtcatatcctctcgta
acaggtcgggatttggcgagcaccaccctccctgggtaccctccacatgtcccccctgct
ggacagggcagctactctgctccaacgctgacaggaatggtgcctggaagtgatttctct
ggaagcccatatagccatccacagtattcgtcctacaatgactcctggagattccctaat
cctggcttgttaggctctccatattattacagtgcagcgaggggaggagccccgcctgcc
acagcagctgcctatgatcgtcactga
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