Xenopus tropicalis (tropical clawed frog): 100493340
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Entry
100493340 CDS
T01011
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100493340 (sntb1)
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Motif
Pfam:
Syntrophin_4th
PH_17
PH
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100493340
NCBI-ProteinID:
XP_012820630
Xenbase:
XB-GENE-1013041
UniProt:
F7A289
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Position
6:complement(138608790..138724934)
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AA seq
509 aa
AA seq
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MAVAAAGALRSGWLEVLVRGRWHKVLGNLYESSLVLSSPERPEDAPSSNSMTNGTNSSPQ
GVRTAFTELPDTVPEAIANKKRAVKVVKQELGGLGISIKGGKENKMPILISKIFKGLAAD
QTQSLYVGDAILTVNGLDLRDATHDEAVQALKKAGREVILEVKYMREATPYVKKGSPVSE
IGWETPPPESPRLGNTSVCPPSPVALSIHGDRKSIPLKMCYVTRSMTVPDPENRNLELHS
PDAKHTVVLRSSDPVTAQAWFNAIHSAASDLVSRVITEVKEQLGKTGISGSTDIGHLGWL
AEKVLGENEKHWKAVLMVLTEKDLLMYDSMPRMKDAWLNPVHAYPLIATRLVHSGPGKIS
SLPGTEFSFATRTGSKQGIETHFFRAETNRDLSLWTRSIVQGCHHSAELVKEISTPCTYK
NNECRLVINYDHGFLLTSEALDGTYSRPLLQFPYEKLKMSSDDGVKMLYLDFGGKDGELQ
LDLHCCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgcagcaggagcgctccggagcggctggctggaagtgctggtgcggggc
cgctggcacaaagttctgggcaacttgtatgagagctccctggtactgagcagcccggag
cggccggaggatgcccccagctctaacagcatgaccaatggcaccaacagcagcccccag
ggggtccggactgccttcaccgaactgcccgacaccgtgccggaggccattgccaacaag
aagagggcagtcaaggtggtcaaacaggagctgggggggctgggcatcagcatcaagggg
ggaaaggaaaacaagatgcccattctcatcagcaagatcttcaaggggctggcagcggat
cagacccagtccctgtatgtgggagatgccatcctgactgtcaacgggctggatctgagg
gatgccactcatgatgaggcggtgcaggcactaaagaaggctggcagggaggtgatcctg
gaggtgaaatacatgagagaagcaacgccctacgtgaagaaaggatcccccgtttcggaa
atagggtgggagacgcctcctccagaatccccgcgattagggaacacatccgtatgtccg
ccctcgcccgttgctctttccatccatggagacaggaagagcatccctctgaagatgtgc
tacgtgaccaggagcatgacagtgcctgatccagagaacagaaatctggagttgcattca
cctgacgcaaagcacacggttgtcctccgaagttctgacccagtcaccgcgcaggcctgg
tttaatgctatacactcagctgcctccgatctggtcagcagggtgataacggaagttaaa
gaacaattagggaaaaccgggatctcgggaagcacggatattggacatttgggctggctg
gcggaaaaggtacttggagagaatgagaagcactggaaagcggtcctgatggtcctgaca
gagaaggatctgctcatgtatgattccatgcctcgcatgaaggacgcctggctcaatcca
gtacatgcctacccacttatagccacaaggctggtccattccggccctgggaaaatatct
tcccttcctggcacagagttctcatttgctacccggacagggtcgaagcaagggattgag
acccatttctttagagccgagaccaacagggatctctccctctggaccaggtctattgta
cagggctgccaccactctgccgagcttgtgaaagagatatcaactccttgcacttacaag
aataatgagtgtcgcttggttataaactatgaccatggattcttactgacctccgaagcc
ttggatggtacctattcccgacccctgctacagtttccctatgaaaaactgaaaatgtca
tctgacgatggagttaaaatgctctatttagactttgggggcaaagatggagaattacaa
ctggatctccattgttgcccaaagccgatagtcttcatcatccactcgttcctgtccgct
aagatcacaaggcttggcttggtggcctga
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