Xenopus tropicalis (tropical clawed frog): 100493383
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Entry
100493383 CDS
T01011
Symbol
dennd3
Name
(RefSeq) DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100493383 (dennd3)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100493383 (dennd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
uDENN
dDENN
DUF5074
WD40_like
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
100493383
NCBI-ProteinID:
XP_002934521
Xenbase:
XB-GENE-6037499
UniProt:
A0A5S6P6H3
LinkDB
All DBs
Position
6:146837343..146882545
Genome browser
AA seq
1274 aa
AA seq
DB search
MEDALPSGLLEVCALVGAPADRIREIDKVAQKGIRSSQVLEPEIISIFVPPFTSKEETPT
APSAQNYQRLAKRRSFRKKKDKPKSEHGSDNKTDKKDAPAEDITVPKDIDLDGLPQLCFP
GGLQPSSDPKEHSFHFLVFTDVMGKRTYGVVMQYYRSVQDTTSLHNGQIYWDYNSSHTKA
RDTFVPYALCVISRFPYYSALKDCLSCLLMQLKSCKDSDTDNRIKEFAAKLCLIPSPPPG
PLNLVLSMKPLQIVFPSREDLDSPLIDFDLHLPFLCFSPKQVLEIMSCILTEQKIVFFSS
DWALLTLIAECFMVYLYPMQWQHTFVPILSRQMLDFIMAPTSFLMGCHLDHFEEVKKEAE
DLVLISIDGGSILYPLPTEEEGEVPDVPVEAAESFIQRVESLQMHYDLELAHLGAFMDLG
ELRMRKRMWQRNLNSEVQKITLQLIVDIFRDVKAHLNFEHRVFNSEEFLKSRAVGDQPFY
KKVLDTYMFHSFLKARLNKRMDAFCQMEWNTSSETNGRFSTLFDSPRRATAKLKRFRPEH
MFSKKLVISMPNLLEAKETEVPRQWSLRRPDSTNDLKSSTKPVYTFKLPEINFPLLGRCV
QNYYTELNNYLNKEIACLPPDNSTLLARYYYLRGLVYLMQGKPVVALCDFQSLYKTDIRI
FPVELVKKVVVSLSASERQQAERRPELKRLISQVLETEREMAKLDDHVKKFSLPKTHMHL
DDFVRRIQESGIVKDVETIQRLFDALTVGHQKQIDPEIFRDFYNYWKETEAEAEESLPPQ
ITENLDKNECVYKLSNSVKTNYGVGKIAMTQKRLFLLLEGRSGFVEIAPFRNIEEVRITT
VTFIVMRIPTLRIKASTKKEIFEANLKTECELWHLMIKEMWAGRKMADDHKDPQYIQEAL
TNALLMDAVVGSLQTTKAIYAASKLSHFDKMRNEVPMMVPKTTAETLKHRINPSVGETVP
QSVDVLLYTPGQLDASGRDDSSKLWCALGEGKVVVFNASTWSVQQHNVKVGNSKLRCMVG
VEQSQVWIGSSDSSIYIINTHSMVCNKQLTAHRSEVVDILSDDKKIQDRLSFSCSVDGNI
LAWDISTLKIHHKFKLEGHSINSMRLYKDLLLFCTRECILVTKKSGLVYQRVEIAENLRK
VGSSFSAIQLFSPKGQLWVSYAANNEISVFDMNDLSRPAHKVVLQDCTQITCMLRVKHQI
WVGSKGISQGKQKGKIYVIDAEKKTVEKELVAHVDIVKSLCSAEDRYVLSGSGKEDGKVA
IWKVEDSSVITFQI
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcgctgccctccggactgctggaggtgtgcgccctggtgggagcccccgcc
gacaggatccgggaaatagacaaggttgcccagaaaggaataagaagttctcaagtttta
gagccagaaatcatctctatattcgtcccaccctttacatccaaagaggagaccccaaca
gccccttctgcccagaactatcaacggttagcgaagaggcgctccttccggaaaaagaaa
gacaagcccaagtctgagcacgggtcggataacaaaacggacaagaaagacgcgcctgcc
gaggacatcacagttcctaaggatatagatcttgatggcttgccgcaactgtgctttcca
ggaggccttcaaccttcgtcagatccaaaagagcactctttccatttcttagtttttaca
gatgttatggggaagaggacgtatggagtggtcatgcagtactatagatctgtgcaggat
acaacaagccttcataatggacagatatactgggattataactcaagtcatacgaaggcc
cgggacacctttgttccgtatgcattgtgtgtcatatcaaggtttccatactacagcgca
ctaaaagattgtctttcatgcttactgatgcagctgaaatcctgcaaggattccgataca
gataatcgcatcaaggaatttgcagcaaaactgtgcctgataccaagccccccacccgga
cccctcaatttggtgttgagcatgaaacctcttcagatcgttttcccatcaagagaagat
ttagacagtccattaatcgacttcgatcttcaccttccttttctgtgcttcagtcccaag
caggtgttagagatcatgtcgtgcatcctgaccgagcagaaaattgtcttcttctcctct
gactgggcccttctcacactcatcgctgaatgctttatggtttacctgtaccccatgcag
tggcagcatacatttgtgccaattttgtcacgtcagatgttggactttatcatggcgcca
acgtcctttttaatggggtgccatctggatcactttgaagaggttaagaaggaagcagag
gatttggtactaatcagcattgatggtgggtcaatattgtaccccctgcctactgaagag
gagggagaggttcccgatgttcctgtagaagctgcagaatccttcatacagagggtagag
agccttcagatgcactatgacttggagttggcccacctcggtgctttcatggatcttggc
gagttacgaatgcgcaagagaatgtggcagcgaaatctcaatagcgaagtgcagaaaatc
accctgcagcttattgtggacatattcagggatgtaaaagcccacctcaattttgaacac
cgagtatttaacagtgaggaattcctgaaatccagagcagtgggagaccagccattttat
aaaaaggtcttagacacatacatgttccattcatttttaaaagctcgtctgaataaaaga
atggatgctttctgtcagatggagtggaacacgtcttctgaaacaaatggacgattcagt
acgctgtttgacagcccaagaagggccaccgcaaaattgaagcgctttcggccggagcac
atgttcagtaagaaacttgtcataagtatgccgaatctgctagaagctaaagagactgag
gttcccaggcagtggtctctcaggaggccagactctactaacgacctgaaatcatcaaca
aaacctgtttatactttcaagctgccggaaataaatttccctcttttgggtcggtgtgtg
caaaactactacacagagctgaataactacctcaacaaagagattgcctgcctgcccccc
gataactctaccctgcttgcccgatactattacctacgcggcctggtctatttaatgcag
ggaaaaccggtggttgcactttgtgactttcagagcttgtataagactgacattagaatc
ttcccggtcgagttggtgaaaaaggttgtggtgtcgttatcggcgtccgagcggcagcag
gcggaacgcaggccggaactcaagagactcattagccaggtattggaaacggaaagggag
atggccaagttggacgaccacgtaaagaagttttccttgccaaagacacacatgcacctg
gatgattttgtgcgtcgcattcaggaatcggggattgtcaaagatgtcgaaacgattcag
agactgttcgatgctttaactgtaggtcaccagaaacagatagacccagaaatttttagg
gatttctacaattactggaaggaaacagaagcagaagccgaggagagcctgcctccccaa
ataacagaaaacctggataagaacgagtgtgtctacaagctgtccaactccgtcaagacc
aactacggggtggggaagattgcaatgactcagaagcgcctgtttctcttgctggaggga
agatctggctttgttgaaatcgctccattccgaaacatagaggaagttagaatcaccact
gtaaccttcattgtgatgaggataccaactcttcgaataaaagcctcaaccaaaaaagag
atctttgaagccaacctgaagacagaatgtgaactgtggcacctcatgatcaaagagatg
tgggccggcaggaaaatggctgacgaccacaaggatccgcagtacatccaggaggcgcta
acgaatgccctgctgatggatgcagtcgtcggctccttgcagaccacaaaagccatttat
gctgcttctaaactttcccactttgataagatgaggaacgaagtgcccatgatggtccca
aaaacaactgcagaaaccttaaagcacagaattaacccttccgttggcgagactgtcccg
cagtcagtggatgtgctgctctatacaccaggccaactggatgcttccggaagagatgat
tcctcaaaactgtggtgtgcactaggagaaggaaaagtcgttgtcttcaacgcttctact
tggtctgtccaacaacacaacgttaaagtgggaaattctaagctaaggtgcatggtggga
gtggagcaaagtcaggtttggattggatccagcgactcttccatttacatcataaacact
cacagtatggtgtgtaacaagcagcttactgcccatcggtcggaagtagtcgatattctc
tcagatgataaaaagattcaggacagactctccttctcctgcagcgtggatgggaacatt
ttggcctgggacatcagtaccctgaagatacaccacaaatttaagctggagggccattca
ataaactcgatgaggctctacaaggatctcctcctgttctgcacaagagagtgcattctt
gtcaccaaaaaatcaggcctagtatatcagagggtggaaattgccgaaaatctcaggaaa
gtgggctcttccttttccgccattcagttattttctccgaagggtcagctgtgggtgtcc
tatgccgcaaataatgaaatatccgtctttgatatgaatgacttatccaggcctgcacac
aaggtcgtccttcaggactgtactcagatcacttgcatgctgagagtcaaacatcagatc
tgggttggcagcaagggcatctcccaaggcaaacagaaaggaaagatctacgtcattgac
gcagagaagaagactgtggagaaggaactggttgcgcacgtggatatagtcaaatccctc
tgttcggcggaggacagatacgttctgagcggctccgggaaagaagatgggaaagtcgct
atttggaaagtagaagattcatctgtgataacttttcagatttaa
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