Xenopus tropicalis (tropical clawed frog): 100493436
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Entry
100493436 CDS
T01011
Symbol
map1a
Name
(RefSeq) microtubule-associated protein 1A isoform X2
KO
K10429
microtubule-associated protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100493436 (map1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100493436 (map1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100493436 (map1a)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100493436 (map1a)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
100493436 (map1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
100493436
NCBI-ProteinID:
XP_002932310
Xenbase:
XB-GENE-999071
UniProt:
A0A6I8SZ90
LinkDB
All DBs
Position
3:107135208..107210083
Genome browser
AA seq
2926 aa
AA seq
DB search
MDGISEFADYVSETVDVPSPFDLLEPPNSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNI
LVDGGSERKSCFWKLVRHLDRIDSILLTHIGADNLPGINGLLQRKIAEQDEEQSQGSTTY
SDWMKNLISPELGVVFFNVPDKLKMPESNMKVKRSIEEACLTLQYLNKLGIKPEPLYRVV
SNTIEPITLFHKMGVGRLDMYILNPVKDSKEMQFLMQKWAGNSKAKTGIILANGKEGEIS
VPYLTSITALVVWLPASPTEKIVRVLFPGNAPQNKILEGLEKLKHLDFLRYPVATQKDIS
AGIPTTTKHTKIKQRVDSKESLKSTPRPSTGKPNKREEIAEQLTKEIKTEPAKETRLEKK
TLKDSTDKSTEKVLKFEKVKTETSESVKAEKRKLLKEKTGKKYTKDKMSKLEEKKDKEKK
EIRKEKTDLKKDILKKEDKKDTKKEEKKKELKPDVKKMMKPDLRPFTPEVRKTLHKAKLP
SKGKTEKIKSKPEKETITAEQKTSQLQQIQKQQQLTHMAEQRSAMSSPEDLTKDFEELKY
EDKLEQIQYEDDDKNISKTETTEQRHLDVLVVQSQFKEEISLNKTTSDKKTPLESPDEGI
TTTDMEGESPHEEKIVYQADETMEMVDEGAAMEEPTEMTEYEEEGITEKVSETIPPFEKP
TLGRNRLESMPTLDIQDLEDKENEVDEKGILDRKQKEEITEPCDEYFASTMAEEEKEGEK
SVEVVEKAEVEEMEEYVEEIGEELKSKDDGEVECLNEQEENIPIPIVNQETDLVSKNYGN
IMSKEASYFSGAVVTSGTTAEQISYIQDETMPGYSETEQTISDEEIHDEQEERIPHLQYD
VGSYDISVPDHPGSFEAVHGIKAISSSGITTKGYILQEPEIVGYPTNIVAAPLAEEEHIS
SATSITECDKLSSFATSVAEDQSVASITAPKTEETGKSSLLLDTANSIPSSHTEATQGIE
YLPSAGTISPTSSLEEDKCFKSPPSEDFQSLISSGKDQIRHQYPAEEVEETHQFDKTETQ
HYSSLLLCEGKDFDISYTYCTDMNKTPTHLSDEATHFIQVDSSFVEGEERCLSPDDSTVK
MASPTHSGPTSTGHTPFHQSPVEDRYESTQAELFKAADKLSHETEEKIDSKPDYDKSPEN
GDQYFSKTVASINEISEAEVILQAKTPLLMDDLKKDYLEKDSIITKDSAIAEEADILQQQ
NELFSETATFGKPDDTAYSAGTYAQFEEPPGKGLTDSFTSEHIMIQKQTELGLFHSVSTK
ELPSEDTKCASYLEQSPIKDEITQENSSQDILLEDTKSLSFTEQGKEDDTSLQMSLIEQS
PIINETCQITPAKDEFLENEKSLDLIKQTKDYKCSFDDMSPGYVDPLQSIEETLTQDKTH
LEDYGKPSLDHAQVFSAVSGIQKDVSPEPLPEVYPADDMDSDFKQQMHQKEDTFLALSSS
SPDDSESLSLADHKSPLETGGNSHSLTPSGIEEQSAEMENDYMKQLTSEKRVWFTEGNES
GRKENKLRYTEQGESTFLDEAHDWDGESALRSDFSDQSTPDTEDANNLVAEYAHFHKDTE
HTPESMDISANILSDNSKTLCQDTILHTEIVYGSEEKEKKSYVDTSSPPELCSEKLPTDS
DSLFDKGFYPDSSLSKVSFEGEEIKKSTVDETQSFADEHIYSYEKPMYDIQDLTREISTS
DADILTGMQTVSFLDKYDDSLGADVPISTKEITVASSPQEQTEVVFTIDKEIKHEPYKSP
TKETEQEYVETSYAESSSLSGFTLATHLDDVTDNMFLKQDKKSSPSSLSYPEETSVKKSL
SPCQLYPQEKDIYGSSKKSAAEEREPTPYPDDKTFQYADIYEKIVSGVSHTDHIIEEVEP
YSAGYLEKENRAISVLDTGDVQATNKEFHHEMYSKEEESQLQSSKEKELSSPLSPKDTGS
ITTFEYTEMEKTIYVAKEKATDKTNVLGLEENQNTQSGITFETHGTEAESEVSSHHSQDL
SSKPFTVDHDLHEQPMSYLHALHQDDNISAAKQDSDIEVKSFTAKDTYYEKSEIQEESAS
DSELEKGAKEKSEKEITTDMDEKELHENIIEEERVSDYILHSEQTQHDLNSNVHDQSSTV
QIRGEAAVEHPTFDNTGYNIYENKQNKVFSDIEYTYCPFSAQFDSSDVTDERHQTDHQES
QSFSHSHKEDTFLESCSLGQNDEAPSALERELPEPKWEYLSEATFSEKETYNLPPSALSE
HHFESLPYTGINALGTNCMTISDVATGQHDEYLQVSERACEMDSSQDKHSMLSSPDHSPL
SLTEEKPSIPKIPYEQYSELDAQKEESQSISGSSSEASTPVRRDIAEGLYSHMISTYTAD
TEATVRSLWDVSPLVPADSTKPCLAEEKDSAGDHNSACSYDTDDNTLPCRIECKRPTCMM
MSIMNEQMSSGETTSATMQSYSSLVPSCQKEETSTANGPTEVNNSQEFFQNIQYKEGECF
SAAVKTSPDSDRDSSPCSEEDTEKPNRPSSLMSPVHTLESYSYTQSPERTEDHGDASHEF
EPRLGSSSEYERMLSSSEYLHRKGELSPSFINPSPLDLSDDSDLSQDEGHPSVKGRTHHA
NANTCHVQGTTAEETPPTSVSDSGTSQSDSDVPPETEECPSITADAAMDSDEDADFLPVD
KAMGNSHHSNTRQGHDPHPAPMMDPQPHPPHPDVCMVDPDALVNELNFSKGDKVLKKDLK
EKNKGVRKPLTKVKSTSPARKADSKYSSTLSKQTSRDSADKSHKTTAIRKDKESAEKLQK
PRSPMQTQFSRGEEKDEVSKGSYSNTSKMVNGIKSSTGLSGSKASSTVPPGPPVYVDLAY
IPNHCNEKNTDLEFFKRVRSAYYVVSGNDPGNGEPNRAVLDALLEGKSQWGENLQVTLIP
THDTEVTREWYQQTHEKQQELNIMVLASSSTVVMQDESFPACKIEF
NT seq
8781 nt
NT seq
+upstream
nt +downstream
nt
atggatggtatttcagagtttgcagactatgtttctgagacagtggatgttccttctcct
tttgatcttttggaaccaccaaactctggtggcttcttaaagttgtccaagccatgttgt
tatatatttcctggaggaagaggagactctgcactttttgctgtcaatggatttaacatt
ttagtggatggaggttctgaaagaaaatcttgcttttggaaacttgtgagacatttggat
cgcatagactctatattactaacacacattggagcagataatttgcctggaataaatgga
cttcttcagagaaagattgcagaacaagatgaagagcagtctcagggttctactacctat
agcgactggatgaagaatctaatttctccagaacttggggttgtgttttttaatgttcct
gacaaactgaaaatgcctgaatctaacatgaaggttaaaagaagtattgaagaggcttgt
ttgacattgcagtacctaaataagcttggaattaaaccagaacctttgtatagggtagta
agcaacactattgagccgataacattgttccataaaatgggagttggcagactagatatg
tatattctaaaccctgtaaaagatagtaaggagatgcagtttttaatgcaaaaatgggct
ggtaacagcaaagcaaagactggtattatattggcgaatggaaaagaaggtgaaatctca
gttccgtatctaacgtccattacagcccttgtagtttggttaccagcaagccccactgaa
aaaattgtccgtgttctctttcctggaaatgctccacaaaataaaattttagaaggtcta
gaaaagttaaagcatctggattttttgaggtacccagtagcaacacaaaaagacatttct
gctggtattccaacaactaccaagcacacaaaaatcaaacaaagggtagatagcaaggaa
agccttaaatccactccacgaccaagcacagggaaaccaaacaaaagggaggaaatagca
gaacagctgacaaaggagattaaaactgaaccagccaaggagacaaggcttgagaaaaaa
acattaaaggattcaacagataagtctacagaaaaagttttgaaatttgaaaaagtaaaa
actgagacaagtgaatctgtaaaggcagaaaagagaaagcttttaaaggagaaaactggg
aaaaaatacacaaaggacaaaatgtcaaaactggaggaaaaaaaggataaagagaaaaag
gaaattcggaaggagaaaacagatttaaagaaagacatcttaaaaaaagaagacaaaaag
gacacaaagaaagaggaaaagaagaaagaactaaagccagatgttaaaaagatgatgaaa
cctgatttaagaccatttactccagaagtgagaaagacactacacaaggcaaagctacca
agcaaaggcaaaacagagaaaattaagagcaaaccagagaaagaaacaataacagcagaa
caaaaaacaagccagctgcaacaaatacagaaacaacaacagttaactcacatggcagaa
caaagatcagctatgtcatctcctgaggatctaaccaaagattttgaggaactcaagtat
gaggacaaactagaacaaatacagtatgaagatgatgacaaaaatatttccaaaactgag
accactgaacaaagacatttggatgtgctggtggtacaaagtcagtttaaagaagagatc
tctttaaacaaaacaacatcagataagaagactccacttgagtcccctgatgagggtata
accacgacagatatggagggggagtcacctcatgaagaaaaaattgtatatcaggcagat
gaaacaatggaaatggttgatgaaggtgcagcaatggaggaacccacagaaatgactgaa
tatgaggaagagggcataacagaaaaagtgtcggaaactattccaccttttgaaaagcct
acattgggtagaaacagattagagtcaatgccaacattagacattcaagatctggaagat
aaggagaatgaagtggatgagaaaggaattttagatagaaaacagaaagaggagataact
gaaccttgtgatgaatattttgctagcacaatggcagaagaagaaaaagaaggagaaaaa
agtgttgaggtagtagaaaaggcagaagtggaagaaatggaagaatatgttgaagaaatt
ggagaggaactgaaatctaaagatgatggagaagtggaatgcttaaacgaacaggaagaa
aacattcccatccccatcgtaaatcaggaaactgatttagtttcaaagaactatggaaat
ataatgtctaaggaggcttcatacttttctggtgctgttgtaacatctggcactacagca
gaacagatttcctacatacaagatgaaacaatgcctggttattctgagacagagcagact
atttctgatgaagaaatacatgatgaacaggaagaaaggatacctcatctgcaatacgat
gtgggtagttatgatatttcagttcctgaccatcctggatcctttgaagctgtacatggc
attaaagccatttcatcttctggaataacaacaaagggctatatattgcaagagcctgaa
attgtgggttaccctacaaatattgtggcagcacctcttgcagaggaggagcatatctcc
tcagccacatcgataacagaatgtgataaactttcctcttttgctacttctgttgcagaa
gatcagtctgttgcatctatcacagcaccaaaaacagaagagacagggaaaagctcttta
ttactagacactgccaacagcattccctcttctcatactgaggcaactcaaggtatagag
tacctgccatctgcaggcactatttctccaacatcttctttagaagaggataaatgcttc
aaatcaccaccttctgaggattttcagtcactgatatcttcaggaaaggaccaaatccgc
catcaataccctgcagaggaagtagaggaaacccatcagtttgataaaactgaaacacag
cattatagttcgcttcttttatgtgaagggaaggactttgacatttcatacacatattgc
acagacatgaacaaaactccaacccatctttctgatgaagcaacacattttatacaggta
gattccagctttgttgagggtgaagagagatgtttaagtcccgatgacagtactgtaaaa
atggcatcacctactcattcaggtcctactagcacaggccatactccttttcaccagtct
cctgtggaggacagatatgaatcgacacaagcagagctatttaaagctgctgacaaacta
tcacatgaaacagaagaaaaaattgactctaaacctgattatgacaaatctccagaaaat
ggagaccaatacttcagcaaaacagttgcatcaataaatgaaatttctgaggcagaagtt
atccttcaagcaaaaaccccattattaatggatgatcttaagaaagattatttggaaaag
gactcaataataaccaaagatagtgctattgctgaagaagctgatatactgcagcaacaa
aatgagcttttctcagaaactgcaacatttggtaagccagatgatactgcctactctgct
ggaacatatgcacagtttgaagaaccaccagggaaaggccttactgacagtttcacctca
gaacatattatgatccagaaacaaactgaactgggcctatttcattcagtgtctaccaaa
gaattgcctagtgaagatactaaatgtgcttcttatttggagcagagtcctataaaagat
gaaatcacccaagagaactccagccaagatattttactggaagacacaaagtctttgtct
ttcaccgaacaaggaaaagaagatgatacatctctacaaatgtccctgatcgaacaaagt
cctatcataaatgaaacatgtcagataacaccagcaaaagatgaatttttagaaaatgaa
aaatctctggacttaataaaacaaacaaaagattacaaatgctcatttgatgatatgtca
ccaggttatgtggatcctttgcagtctatagaagaaaccctgactcaagataaaactcat
ttagaagactatggcaagccatctctggaccatgctcaggttttttctgcagtatctggt
attcagaaagatgtatcaccagaaccccttccagaagtatatccagcagatgacatggat
tctgattttaaacaacaaatgcatcaaaaggaagacacatttttggccctgtcctcttct
agcccagatgattcagaatctctttctttagctgaccataaatctccactagagacagga
ggtaatagtcattcattaacaccttcaggaattgaagaacagtcagctgaaatggagaat
gattatatgaagcagcttacatctgaaaagagagtttggtttacagaagggaatgaaagt
ggtagaaaagaaaataaactacgttatacagaacagggagagagtacttttctcgatgag
gcacatgactgggatggagaatcggccttgagatctgatttctcagatcagtcaactcct
gatacagaagacgcaaataatctagtagcagaatacgcacatttccacaaagacactgaa
cataccccagagtcaatggacatttctgctaacattcttagtgataactcaaaaacatta
tgtcaagacacaattctacacacagaaatagtttatggttcagaagaaaaagaaaagaaa
tcctatgttgacacatcatcaccccctgaactgtgttctgagaagctaccgacagacagt
gattctttatttgataaaggtttctatccagatagttctctttcaaaagtatcatttgaa
ggagaagaaattaaaaaatcaacagttgatgaaacacaaagttttgcagatgaacatata
tactcttatgaaaaacctatgtatgatatacaagatctcaccagggaaattagtaccagt
gatgctgacatactgacaggaatgcaaactgtttcatttttggataaatatgatgattct
ttaggagcagatgtgccaatttcaacaaaggaaataacagtcgcctcttccccacaggaa
caaactgaagttgtttttactattgataaagaaataaaacatgagccctataaatcacct
acaaaggaaacagaacaagaatacgttgaaacttcctatgcagaaagtagttctttatct
ggctttactttagcaacacatttggatgatgtaacggacaacatgtttctaaaacaagac
aagaaatcctctccaagttcattaagctatcctgaagagactagtgtcaaaaaatctctt
agcccatgtcagctataccctcaagaaaaggacatttatgggtcttcaaaaaagagtgca
gcagaagaaagagaaccaacaccatacccagatgacaaaacgtttcagtatgctgatatt
tatgaaaaaattgtttctggagttagccacactgatcacattatagaagaggtagaacca
tatagtgctggttacctagaaaaggaaaacagagctatatcagttttagatacaggagat
gttcaggctactaataaagaatttcatcatgaaatgtattccaaagaagaggaatcacag
ttgcagtcctcaaaggaaaaggagctctcatctcctctatctccaaaagatacaggaagt
atcaccacatttgaatacacagaaatggagaaaactatttatgtagctaaagaaaaagct
acagataaaacaaatgtgttaggtttggaagaaaatcaaaatacacagagtggaattact
tttgaaactcatggaactgaagcagaaagcgaggtatcatcacatcacagtcaggatttg
tcatcaaaaccttttacagtggatcatgatttgcatgagcaaccaatgtcctaccttcat
gcattacatcaagatgataacatcagtgcagccaagcaagacagtgacatagaagtaaaa
agttttacagctaaagatacctattatgagaaaagtgagatacaggaagaaagtgcaagt
gactcagaattagaaaaaggtgcaaaagaaaaatctgagaaggaaataactactgatatg
gatgaaaaagaattacatgaaaatattatagaagaagagagagtgtctgattacatatta
cattccgagcaaacacagcatgatttaaattcaaatgttcacgaccaaagcagcacagta
caaataaggggtgaagcagctgtagaacatcccacttttgacaatacagggtataatatc
tatgaaaataaacaaaacaaagtattcagtgatattgaatatacatattgcccattcagt
gcacaatttgactcttcagatgttacagatgaacgtcaccaaacagatcaccaagaatca
caaagcttttcacattcacataaagaagatacatttttagaaagctgcagtcttggtcaa
aatgacgaagcaccaagtgcattagaaagggagcttccagaaccaaaatgggaatatcta
tctgaggcaacattttcagaaaaggaaacctacaatttaccaccttctgctttaagcgag
catcactttgaatcattgccctacactggtatcaacgcattaggcacaaattgtatgact
atatcagatgtagcaacagggcaacatgatgaatacctacaggtttctgaaagggcttgt
gaaatggactcctctcaagacaaacactcaatgttaagttcacctgatcactcaccacta
agtctgactgaggagaaaccttcaatacctaaaattccttatgaacaatattcagagcta
gatgcccagaaagaggaatctcaaagcatttcgggatcatcttctgaagctagtacacct
gttagaagggatattgctgaaggtttatattcacatatgattagtacttacactgcagat
accgaagcaactgttagaagtctgtgggatgtatcacctctggttcctgctgattccacc
aagccctgtttggcagaagaaaaggattcagctggagatcataattctgcttgttcctat
gatacggatgataatacattgccatgcagaatagagtgcaagagaccaacttgcatgatg
atgtccattatgaatgagcaaatgagcagtggtgaaacaacttcagcaacaatgcaatca
tattctagtctggtgccatcatgtcaaaaggaagaaacatccacagcaaatggtcccaca
gaagttaataacagccaagagttttttcaaaacatccaatataaagaaggtgaatgtttt
tcagcagcagtaaaaacctcacctgattctgacagagattcatctccatgctctgaggag
gatacagagaaaccaaaccgaccttcttctcttatgtcccctgtacatacattagagtct
tactcttacacacaaagtcctgagagaacagaagaccacggtgatgcctctcatgagttt
gagcctcggttaggatcatcaagtgaatatgagcgcatgttgtcatcatctgaatatcta
cacagaaaaggcgaactttctccttcattcatcaacccaagtcctcttgacttatcagat
gacagtgatctctcacaagatgaaggtcatccttctgttaaaggtaggacacaccatgca
aatgcaaatacatgccatgttcaaggcacaacagctgaggaaacaccacctacatctgtt
agtgactcaggaacctctcaatctgattctgatgttccaccagaaactgaagagtgtccc
tccataactgctgatgctgcaatggattcagatgaagatgctgattttcttcctgtggat
aaagcaatggggaattcacaccacagcaatacaaggcaaggtcatgatcctcatcctgct
ccaatgatggaccctcagcctcaccctcctcaccctgatgtttgcatggtagatccagat
gctttagttaatgaattaaatttcagtaaaggggacaaggtgctcaaaaaagatctaaaa
gagaaaaacaaaggagtcagaaaaccattaacaaaagtcaaatcaacttctcctgctagg
aaagcagactctaagtattcctcaacactctctaaacaaacatccagggactcagctgat
aaatctcacaaaactacagctataaggaaagataaggaatctgctgaaaaactgcagaaa
ccaagaagcccgatgcagacacagttctctagaggggaagaaaaagacgaagtgtctaaa
ggcagttacagtaatactagcaagatggttaatggcatcaagtcatctacaggtctcagc
ggctccaaagcaagttccacagttccacctgggccaccagtctatgttgacttggcatat
attcctaatcactgtaatgagaagaatacggatttggagttctttaagagagttcgttct
gcatattatgttgtaagcggtaatgatccaggtaacggagagccaaatcgagctgtgtta
gatgcacttctggaaggaaagtcacagtggggagagaaccttcaggtgactctgatacca
acgcatgatacagaggtgacccgggaatggtaccaacaaactcacgagaaacagcaagag
cttaatattatggtcctggcaagcagtagcactgtagtgatgcaagatgaatctttccca
gcatgcaagattgagttctaa
DBGET
integrated database retrieval system
