Xenopus tropicalis (tropical clawed frog): 100493458
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Entry
100493458 CDS
T01011
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100493458 (thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100493458 (thsd4)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
100493458 (thsd4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_spondin
ADAMTS_CR_3
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
100493458
NCBI-ProteinID:
XP_017947904
Xenbase:
XB-GENE-6035027
UniProt:
A0A6I8R7I7
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All DBs
Position
3:98298973..98653733
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AA seq
988 aa
AA seq
DB search
MVDCLIVSLRLVSSIVFLGVQLVVSQQSIDHRKVPQRIEKQSDTAENITTVPSGTWGTWG
PWSACSRSCSGGVMEQTRPCLPAHYQQRSFQAPSQQYSTGERTHSNQNNLHHDTVINPYA
GHVVSAIRTSIPLHRRGENPQFNIQSSGDLSQNHHNRGILRGGRQPLIPGHIPRHEKRNR
TRGLISPGSYGYGKVPYGLPLQRDTGQEARRTRRQRQSVRQSTYKQSTDALVNQRQATYS
QVSSVPQGLYPDISRHGLASLQLLQEKPQVPRGATAITCIGPYKQYKLCNKNLCPGSNRG
IREVQCASYNNKPFMGRLYEWEPFTEEKGALKCELTCRAVGYRFYVRQAEKVIDGAPCDD
NGTAVCVSGQCKNIGCDDYLGSDKVLDKCGVCGGDNTACKVVSGVFKHVLIKVGYHKVVE
IPEGATKINVTEMTKSNNYLALRSRSGRSIINGNWAIDRPGRYEGGGTMFTYKRPNEISS
TAGESFLAEGPTNEVLDVYMIHQQPNPGIHYEYVIPAENAISPQLPPHRRPVEPFNGQLE
ETSDPTENGDSFSEIDTESFPGRHPGRYPSHQPDNQVLPLQPPRRSRDFNWKQVGSTECS
TTCGKGSRYPVFRCVNRNTHEETADGFCDASAKPSAEEEPCNLFPCPAFWDIGEWSECSK
TCGLGMQHRQILCRHSYANRTLTVQPHRCQSLEKPETTSTCQLKICSEWQIRTDWTPCSV
PCGVGQKTRDVKCISNIGDIVDDEECNMKLRPDDIENCDMGPCAKSWFLTEWSDRCSAEC
GEGVRTRSVVCMSNHISSLPLEGCGNHRPPETTTCNNGPCEGKVEWFMGSWSQCSVECGT
GTQQRDVICIKKTAEGFNVVNPNECSYLERPPNQQSCHLKSCGAKWFYTDWSTCSKSCEG
GFRIREVRCLADDMSHSDKCDQELKPEDTESCNTQDCMPEIDENCKDKYYNCNVVVQARL
CVYAYYKTACCASCLRAASRQSGFLGRR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtagactgtttgattgtatctttacgattggttagctcgattgtttttttaggagtt
cagctggttgtctcccagcagtccattgatcacagaaaggttccacagaggatagagaag
caaagtgacacggcagaaaatattacaacagtgccatctggcacctggggaacttggggt
ccttggtcagcttgctctagaagttgcagtggaggtgttatggaacaaacccggccatgc
cttccagcccattaccagcaaagaagcttccaggcccccagccagcagtactcaactgga
gaaagaactcacagcaaccagaataatcttcatcatgacactgtaattaatccttatgct
ggacatgttgtgtcagccatccggacatccatacccctacacagaagaggggaaaatcca
caattcaacattcaatcttcaggagatttaagtcaaaatcatcataacagaggaatactg
aggggaggcagacagccgctgataccagggcatattcctaggcatgaaaaaagaaacaga
acccgaggtctaataagtccaggatcctatgggtatggaaaagtgccgtatggattgcca
ctacaaagggatacaggtcaggaggctcggagaacccggaggcagcgtcagtcagttcgc
cagtctacttataaacagagtacagatgcactagttaaccagcggcaggccacctattca
caagtgtcctcagtaccccagggcttatacccagatatttccagacatgggttggcatcc
ctccagctattgcaggagaaaccgcaagtgccacgtggggccacagcaataacatgcatt
ggaccctacaaacagtacaagctgtgtaataaaaatctgtgtcctgggagcaacagaggc
atcagagaagtgcagtgtgcatcctataataacaaaccctttatggggagattgtatgaa
tgggaaccatttacagaagaaaaaggtgcattaaagtgtgagctgacttgcagagctgtg
ggctacaggttctacgtgaggcaagctgagaaggttatagatggagcaccttgtgatgac
aatggcacggctgtttgtgtttctggtcagtgtaagaacattggctgtgatgactatttg
gggtcagataaagtgcttgacaaatgcggcgtctgcggaggagataacacagcttgtaaa
gtagtctccggagtcttcaagcatgtattaataaaagtagggtaccataaagttgtggaa
attccagaaggtgccacaaaaataaatgtgacagagatgacaaaaagtaacaactattta
gccctacgcagtcgatcgggcagatcaatcatcaatggaaactgggcaattgacagacct
ggcagatatgaaggaggtggaaccatgttcacatataagagaccgaatgaaatttcaagc
actgcaggcgaatcatttttagctgaaggccccacaaatgaggttcttgatgtttatatg
atacatcagcagccaaaccctggaattcattatgagtatgttattccagcagaaaatgcc
atcagccctcagctacctcctcatcgacgaccagttgaaccatttaatggccagttagaa
gaaacctcagaccctactgaaaatggagattcctttagtgaaatagacactgaatctttt
cctggtagacatcctgggagatatccttcacatcagccagataaccaagtacttccatta
caaccacccaggcgaagccgagacttcaactggaaacaagtggggtcaacggaatgttca
actacgtgtgggaaagggtcccgctacccagtgtttcgctgtgtaaacagaaatacacat
gaagagacagcagatggtttctgtgatgccagtgccaaaccaagtgcagaagaggagcct
tgcaatctctttccttgcccagccttctgggatataggagagtggtctgaatgcagtaaa
acctgtggtctgggaatgcagcaccgacaaatcctgtgcagacacagctacgctaaccgc
actctaacagtacagccacaccgctgccagagcctagagaagccagagaccaccagtacg
tgccaactaaaaatctgcagtgaatggcaaataaggacagactggacaccttgttcagtg
ccctgcggggtgggacagaagacccgtgatgttaagtgcattagtaacattggggatatt
gttgacgatgaggagtgcaacatgaagctacgtccagatgatattgagaactgtgacatg
ggtccatgtgcaaagagttggttccttacagaatggagcgacaggtgctctgcagaatgt
ggagaaggtgtgcggacacggtctgtggtatgcatgtccaaccatataagcagcttgcct
ttagaagggtgtgggaaccacagacctcctgaaactacaacatgcaataacggaccttgt
gagggcaaagtagagtggtttatggggagttggagtcagtgttctgtggaatgtggtact
gggacacagcagagagatgtcatttgcataaaaaagacagctgagggtttcaacgtagtg
aatccaaatgaatgttcctatttggaacgaccccctaaccaacaatcctgccacctcaaa
tcctgtggagcaaagtggttctacactgactggagtacatgctctaaatcttgtgagggg
ggatttcgaatccgcgaggtacggtgtcttgcagatgacatgtctcacagtgataagtgc
gatcaggaattaaagccagaagacacggagtcctgcaatacccaagactgcatgccagaa
atagatgaaaactgcaaagacaaatactacaactgcaacgtggtggtacaggccagactg
tgtgtttatgcttattacaagacggcttgttgtgcatcctgcctacgggcagccagcaga
cagtcaggatttttggggagaagataa
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