Xenopus tropicalis (tropical clawed frog): 100493479
Help
Entry
100493479 CDS
T01011
Symbol
ctnna1
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04520
Adherens junction
xtr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100493479 (ctnna1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100493479 (ctnna1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100493479 (ctnna1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100493479 (ctnna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Peptidase_C5
GIT1_C
I_LWEQ
Motif
Other DBs
NCBI-GeneID:
100493479
NCBI-ProteinID:
XP_002932348
Xenbase:
XB-GENE-479599
UniProt:
F7DHT4
LinkDB
All DBs
Position
3:19991764..20017518
Genome browser
AA seq
903 aa
AA seq
DB search
MTLNTGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNSSNKGPSNKKKGRSKKAHVL
AASVEQATQNFLDKGDKIAKESQFLKEELIAAVEDVRKQGEQMRSASGEFADDPCSSVKR
GNMVRAARALLSAVTRLLILADMADVYRLLVQLKVVEEGIVKLRNAGTEQDLGIQYKALK
AEVDKLNVMTAKRQQELKDIGHRDQMAAARGILQKSIPILYTASQACLQHPDVAAFKANR
DLIYKQLQQAVTGISNAAQATSSEETAHQQGGGELAVALNNFDKQIIVDPLGFSEERFRP
SLEERLESIISGAALMADSSCTRDDRRERIVAECNSVRQALQDLLSEYMGNTGRKERSDA
LNSAIDKMTRKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVF
REHANKLIEVANLACSISNNEEGVKLVRISAGHLESMCPQVINAALALAAKPHSKMAQET
MDLFKEQWERQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAG
AIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSGDTN
QTMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQL
IAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDNGNDIIVLAKQMCMIM
MEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRI
ALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKY
QKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAM
ESI
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaatacaggaaacataaatttcaaatgggatccaaaaagcttggaaataaga
acactagctgttgagagacttcttgagcctttagtaactcaggtgaccactttggtgaat
agtagcaataaaggaccctccaataagaagaaaggacgttcaaagaaagctcatgttttg
gctgcatcagtggagcaagcaacccaaaattttttagataaaggagacaaaatagcaaaa
gagagccagtttcttaaagaggaactcattgcagcagttgaagatgttcggaaacagggt
gaacagatgagaagtgcttctggagagtttgctgatgatccttgctcatctgttaagcgt
ggaaatatggttcgtgctgcacgcgcactgttgtctgctgtaacaaggctgctgattttg
gctgacatggccgatgtgtacaggttactggttcagcttaaagtggttgaagaaggtatt
gtgaaattaagaaatgctggaactgaacaagatttaggaatacaatataaggctttgaaa
gctgaagtggataaattaaatgtcatgactgcaaagagacaacaggaattaaaggatatt
ggacacagagatcagatggctgctgctcgtggtattcttcagaagagcattcctattctt
tacactgcttcacaggcatgtctgcagcatcctgatgtagctgcattcaaagctaatagg
gacttaatatataaacagcttcaacaagcagtcactggcatttcaaatgcagcccaggct
acctcatctgaagaaactgctcatcagcaaggaggtggagagctcgccgttgcactcaat
aattttgataaacaaattattgtggatcctcttggctttagtgaagaaagattcaggcct
tcgctggaggagcgtttagaaagcataattagtggagcagccctaatggcagattcttct
tgcacacgagatgatcgtcgggagcgtattgttgctgaatgcaactcagtgagacaagct
ttacaagatcttctttccgaatacatgggaaatactggccgtaaagaacgaagtgatgct
ctaaattcagcaatcgacaaaatgacaaggaagacaagagacttgcgcagacagttgcga
aaggctgttatggaccatgtttctgactctttcttggagactaatgtgccacttctggta
ttgattgaggctgcaaagaatggaaatgagaaagaagtaaaagagtatgcacaagtattt
cgtgaacatgccaataaactgattgaggtagccaatttggcatgttccatatcaaacaac
gaggaaggtgttaaacttgttcgtatatctgctggtcatcttgaatccatgtgcccacag
gttataaatgcagctctggccttagcagctaagcctcatagcaaaatggcacaagaaaca
atggatcttttcaaagagcaatgggaaagacaagttagagtccttacagatgctgttgat
gatattacatcaatcgatgactttttggctgtttcagaaaaccacattctggaggatgtg
aataaatgtgtcatagctctccaggagaaagatgttgatggcttggatcgtacagctgga
gctattcgtggccgggcagcaagagtcatacatgtggtcacctctgaaatggataattat
gaacctggtgtctacactgaaaaagttttagaagctaccaagctgctgtccaatacagtt
atgccacgtttcacggagcaagttgaagctgcagttgaggcccttagcggtgacacaaat
cagaccatggatgaaaatgaatttattgatgcttctcgactagtatatgatggtataagg
gacatccgcaaagctgtgctgatgatcagaactccagaagaacttgatgattctgatttt
gaaactgaagactttgatgtgcgaagcagaacaagtgtccagactgaagatgaccagctc
attgctggacagagtgcaagagcaatcatggctcagctccctcaggaacaaaaggccaaa
attgcagaacaagtggctagcttccaggaggaaaagagtaaattggatgctgaggtgtcg
aaatgggatgacaatggaaacgacatcattgttttggccaaacagatgtgcatgattatg
atggaaatgactgactttactagagggaaggggccactaaaaaacacttcagatgtaatt
agtgcagctaagaaaattgcagaagcgggatcccgaatggataaattaggacgaactatc
gctgatcactgccctgattcagcttgcaagcaagatcttttggcgtatcttcagagaatt
gccttgtactgccatcagttaaatatctgtagtaaggtaaaggcggaagtgcagaatctt
ggtggtgagcttgttgtttctggggttgacagtgccatgtccctgatacaagctgcgaaa
aatctgatgaatgccgtcgttcagacagtgaaagcttcctatgtagcttctacaaaatac
cagaagtcacaaggaatggcgtctctgaacctccctgcagtgtcatggaaaatgaaggct
ccagaaaagaaaccccttgtgaaaagagagaagcaggatgagacccaaactaagatcaag
cgtgcgtctcagaagaaacatgtcaacccagtgcaggctttgagtgaatttaaagcaatg
gaaagcatttaa
DBGET
integrated database retrieval system
