Xenopus tropicalis (tropical clawed frog): 100493499
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Entry
100493499 CDS
T01011
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100493499 (aff3)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100493499 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
100493499
NCBI-ProteinID:
XP_031752871
Xenbase:
XB-GENE-1005828
UniProt:
A0A8J1J4S4
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Position
2:112374315..112509365
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AA seq
963 aa
AA seq
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MTWQDPGHSFAHQQQLKTSDRKMVGSATKDCIGGHQKCVMEKNKNCLLQPVLSPSSSDNP
PQNILVSNKNSSHRRQHPQLNCSLEISSSAPCMQNFSATKLNAVQQKPTAYVRPMDGQEQ
AVDESPKLKSSTEVNILLPLYRELCHKRVSDKIKSDEIDTCSNLNQEEENHLSNIGLSSK
KNADFKDRSPTKCAPQISMLEDDLKLSSDEEDIDQQAVQEESLGVQSDSGEVQDLSKRTS
GVSTLTSSSSSESDTSSESDSESESSSSEAECTKASGYISPEPEQPTSNKWQLDKWLNKV
HPNKTVILSNTHCPSYGSLKEDAGNSENLSQICQSNHNCNKDTREDKRPWNICTDLGNNK
DTGLKSSASIEIAASIAVAVPTTESTFQRQPACRKLTRRTEQTSTGDKQNCYSPDEPSLN
QATVGDNITEQPKSRLLGTGRGLYKRDPRTSKLGAEIRRTRGLNRSASKSKEFIQFSSQS
SDLGIETELEISALSTNTSATPATENNHRLKEWGGNNINRASPCVANTTTTTDLAKELDE
QYYTLVPFGRNENVFSIKGNDEVKSLWVRIDLTLLSRIPVELAQETLIMNTSMKEAHRSS
THKSFTSVAEKALEKTRKKRKSENEASREVKKNHVEKDNCLQETVLSDTFDMANLHSTNP
IRTSMSESKSHVYQRSLHVPSETSTLLHTEDVHLNLWSSLPHGHKDLRSQMLFDNRPRSA
DYFMQEAKQMKHKADAMMDKFDKVLNYTEAALSFIECGNAMEHGPIESKSPYTMYAETVE
LIRYALRLKSHSGPNATSQDKKITALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKSS
SKASQASSSQGSNGKTTGTPSPTSPSPSSVSSVGSQGSTSNSSIISIPQRIHQMAANHVS
ITNSILHSYDYWEIADNLTKDNQEFFNELDVLMGPITLHSSMEHLVQYTRQGLHWVRHSA
HML
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacctggcaggatcctggccattcatttgcgcatcagcaacagttaaaaacatctgat
cggaaaatggttggttctgctacaaaagactgtataggtgggcaccagaaatgtgttatg
gaaaaaaataaaaactgcttgttacaacctgtattatcaccatcctcatctgataaccct
ccacaaaatattttagtgagtaataagaacagttcccacaggagacaacatccacagcta
aattgcagcctagaaatcagcagcagtgcaccctgtatgcagaacttttctgccacaaag
ctgaatgcagttcagcaaaagcctactgcatatgtgcgtccaatggatggtcaagaacag
gcagtagatgagtcgccgaagctaaaatcttccaccgaagtgaatattctcctccctttg
tatagagaactttgccataaacgtgtctctgacaagataaagtctgatgaaatagataca
tgctccaatctcaaccaagaagaggagaatcatctgagcaacataggactatccagtaaa
aagaatgctgatttcaaggacaggagcccgacaaagtgtgcacctcagatatcgatgttg
gaagatgacttgaagctaagcagcgatgaggaggatattgatcagcaggcagttcaggaa
gaatccttaggagtccaaagtgacagtggggaagttcaggatctcagtaaaagaacttca
ggagtttccacactgacaagcagcagctccagtgaatctgacactagttcagagtcggac
tctgaaagcgaaagcagttccagcgaggcagagtgcactaaggcttcaggctacataagc
cctgagcctgagcaaccaacatcaaacaaatggcaattggataagtggctcaacaaagtt
catcctaacaaaaccgtgattctcagcaatacacattgcccttcttatggtagtttaaag
gaggatgctggcaacagtgaaaatttgtcacaaatatgccagtctaaccataactgtaat
aaagatacaagggaggacaaaagaccatggaacatatgcacagacctagggaataataaa
gacacaggattaaaatcttcagcttccattgaaattgctgcttcgatagctgttgcagtt
cctacaacagaaagcacttttcagagacaacctgcttgcagaaaactcacaaggaggaca
gaacagacatctactggagataaacagaactgctatagtccagatgagccttccttaaac
caagcaactgttggtgataatataacagaacagcctaaaagcagattgttgggaacaggt
agaggtttgtacaaaagagatcccaggacatctaaactaggggctgaaattaggaggact
cgaggtttaaacagatcagcttccaaatccaaggaatttattcagttttcatctcagtct
tcagatcttggaatcgaaacagaactggaaatctcagctctttccacaaatacatcagcc
actccagcaactgaaaataaccacagacttaaggagtgggggggcaataatattaatagg
gccagtccatgcgttgccaataccactaccacaactgacttagctaaggagctggatgaa
cagtattacacactggttccatttggtaggaatgagaatgtcttttcaataaagggcaat
gatgaggtcaagtcactttgggtcaggattgatttaactcttttatcaagaataccagtg
gaactggcccaggagactcttatcatgaataccagtatgaaagaagcacacaggtcctca
actcataaaagttttacttcagtagcagagaaggctttggagaaaaccaggaagaaacgt
aagtctgaaaatgaagcgtctcgggaagtgaaaaaaaatcatgtagaaaaggacaactgt
ttgcaagaaactgttttatctgacacctttgatatggccaatttacacagcaccaacccc
atcaggaccagcatgagtgaaagcaaatctcatgtttatcagagatccctccatgttcct
tcagaaaccagcactttgcttcatacagaagatgtgcacttaaacctttggtcatctttg
ccacatgggcacaaagatttaagaagtcagatgttgtttgacaataggccgcgcagtgca
gactattttatgcaagaagctaaacagatgaagcataaagcagatgcaatgatggacaaa
tttgacaaagttctgaattacactgaagcagccttatcgttcattgagtgtgggaatgca
atggaacatggccccattgagtcaaagtctccatatacaatgtatgctgaaacagtagaa
ctaataaggtatgccttgaggttaaaatcacactcgggtcctaatgcaacttcccaggac
aagaaaatcacagcattatgctatcgctgtttggctcttctgtactggagaatgtttagg
ctcaaaagggatcatgctgtaaagtactcaaaagctcttattgactatttcaagagctca
tctaaagcatcccaagcttcatcctcacagggttccaatggaaaaaccactggtactcca
tcccccacatcacctagtccttcttcggtgagttctgttggttctcaaggaagtacctcc
aacagctctattattagcatcccacagcgaattcaccagatggcagcaaaccatgtcagt
attaccaacagcattctgcacagctatgactactgggagattgctgataatctcaccaaa
gacaaccaagagttctttaatgagcttgatgtgttaatgggaccgatcacgctgcacagt
tcaatggagcacttagtacagtacacacgtcaaggacttcattgggtacggcacagtgca
cacatgctttag
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