Xenopus tropicalis (tropical clawed frog): 100493580
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Entry
100493580 CDS
T01011
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100493580 (rnf169)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100493580 (rnf169)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100493580 (rnf169)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100493580 (rnf169)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
100493580 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
100493580
NCBI-ProteinID:
XP_031752146
Xenbase:
XB-GENE-6047625
UniProt:
A0A8J1J667
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Position
2:175149344..175164922
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AA seq
499 aa
AA seq
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MSRARRGTGRAAQINDEKEKEDKDSEDLSQKLPQAEAESLLLKLNQQPQRLSDSENEEPI
PGRVPHRSAFVPKSSANSLTSLAWSRHSKVERSQSCTDTVNESFPLGRRKAAPAPKVKVP
FGGCLSSAVVGVLLSTENSRSFSAPVLTADKRLSLNPLTSFVPLHKPERSISPESNDSIS
EELNHFKPIVCSPCTPPKRLPDGKVLSPVIIKSTPRNLRKSLQKPTSYEASPVILKKWEQ
VFQDRQMKRTLSKGTLTSSAEPDEGASSQKNQSLSSRELFACKDSPSGKRKSLLGDLELL
PSSSKSVQLEMNDEGQNQVLPNNDSLVGMGPPTRRRGATGFTDLNSNAHGGSKPIEAERE
KTLPHSKCLRVTSLKSAMKRPHRTSAQPVNMQNGACFSAAENISPQLPQRRGQKKRCKTK
HLEQNGSIKRLRVTRGDRRVQGLDLCWKETEPRLTQEEEDKKLALKLQQIFDKETRTVNR
CKGSRDEYPLRSKSTAGAN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggcccggagagggacggggagagcggcccagataaatgatgaaaaagaaaaa
gaggataaagattccgaggatctgagccagaagttgccccaggcagaggcagaaagtctg
ctgcttaagctgaaccagcagccccagcgcctctccgactctgagaatgaagagccaatc
ccaggcagggtccctcaccggtcggcctttgttcccaagagcagtgccaactccctgacc
tccttggcctggagccgccacagtaaggtggaacggagccagagctgcaccgatacagta
aatgagagcttcccgctgggcaggaggaaagcggcaccggccccaaaagtcaaggtcccc
ttcggaggatgcctctcttctgcagttgtcggggtcctgttgtccacagaaaacagccgc
tccttctccgcccctgttctgacggctgacaaacgcctgtccctgaaccctctgacctcc
tttgtgccgctgcataagcccgagcgatccatcagcccggagagcaacgacagcatttcc
gaggagctcaaccactttaagccaatcgtgtgctctccttgcacccctcccaagagattg
cccgacggcaaagttctaagccccgttatcatcaagtcgacgcccagaaacctcagaaag
agcctccagaagcctaccagctacgaggccagccccgtgatcctgaaaaagtgggagcaa
gtcttccaagaccggcagatgaaaaggaccctctccaaagggacgttgacatcttccgcc
gaacccgatgaaggggcttcctcccaaaagaaccaatcgctgtccagcagggaactgttc
gcttgtaaggacagccccagtgggaagcgcaagtctttactgggggatctggaactttta
ccctcctctagcaaaagtgttcagttggaaatgaatgatgaaggacagaaccaagtttta
ccaaacaacgatagcctggtgggcatggggccccccactaggaggagaggggccacgggc
tttactgatctcaattccaatgcacatggaggctccaaaccaatagaggctgagagagaa
aagactctgccccattccaagtgtcttcgagtaacatcacttaaatcggcaatgaaacgc
cctcacagaaccagcgcccaaccggtcaatatgcaaaatggcgcctgcttcagtgccgct
gagaacatcagcccccagttgccccaacgcagaggccagaagaagagatgtaaaaccaag
cacttagaacagaacggctccatcaagaggttaagggtcacgcgcggggacagacgtgtt
cagggcctggacctgtgctggaaagagacagaaccaaggttgacccaagaggaggaggac
aaaaagctggcacttaagctccaacagatattcgacaaggaaacacggacggtaaatcga
tgcaaagggagccgggacgagtaccccttgcgttccaaaagcaccgccggcgcaaactag
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